DRSC/TRiP Functional Genomics Resources

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Protein Alignment a and stxbp4

DIOPT Version :10

Sequence 1:NP_524641.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster
Sequence 2:XP_009305073.1 Gene:stxbp4 / 567916 ZFINID:ZDB-GENE-110420-5 Length:749 Species:Danio rerio


Alignment Length:565 Identity:113/565 - (20%)
Similarity:204/565 - (36%) Gaps:146/565 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   804 QQYRYLIVELEPYGMAQKDGRLRLGDEIVNVNGKHLRGIQSFAEVQRLLSSFVDNCIDLVIAHDE 868
            :::...|..:.|.|:|.:|||||.||.|::||..:|||:.:...|:.|..:...|.:.|::..|:
Zfish    59 EEFGIFIKRILPGGVAAQDGRLRPGDLILDVNNMNLRGVTNEKAVEVLRMASATNHMSLLVVRDD 123

  Fly   869 VTTVTDFYTKIRIDGMSTQRHRLSYVQRTQSTDSLSSMQSLQLQQERIQGHNTEQEQEAQGEDQC 933
                            :::|.....:::..|:.|.||            |.:|........:...
Zfish   124 ----------------ASRREFTELMEKYGSSSSTSS------------GSDTSVSTGKMTDTAS 160

  Fly   934 DARSMASVSTM------PTPMPLMQHRRSSTPRHSLDV---------GAPEHELLRRRARSSSGQ 983
            .:.|..|.|.:      |:|:.......|.:|:...|.         |.....::|..|..:.| 
Zfish   161 SSSSSRSTSPLLLSPKEPSPVYTTACINSPSPQVCTDCMIQLICVAKGTGLGLVIRGGANRAEG- 224

  Fly   984 RSLALTPTPLFASGSSSCSSSPNHRLLDNENDPANDTDSYTPVYANRAASVCVASSLADDEKWQL 1048
                  |...............:.||...:...:.:.:|...|....|.|:...:.|..|...::
Zfish   225 ------PMVFVQEIIQGGDCQKDGRLKSGDQLISINKESLVGVTHEEAKSILTRTKLRPDPTVEI 283

  Fly  1049 -LARKRCSEGSALSATPNPQQFGQRTHYARNSINL---ANSHYRSLRFAHSRLSSSRLSLFMQAP 1109
             ..|:|.|.||  |:.|:            :.|:|   .::::.:.:...|.||.:.|       
Zfish   284 AFIRRRSSSGS--SSGPH------------SPISLQPSCSTNHPAPQTKPSGLSGAAL------- 327

  Fly  1110 PNSLTVGEGVANTPSSTATT--TTDLTNQQQQQQNQQQTHQSLYIKHSPKSVSLFSPNPYVNASS 1172
            |..|.  ..:||||:|.:.|  :.:||                       .|...:..|.:...:
Zfish   328 PGGLV--PKIANTPNSGSETLPSVELT-----------------------KVRAATGKPVLAPVT 367

  Fly  1173 SPASASTS-AGAGSSLAPPAAALMHHRPSLP---VAKLTIRDEEMAEVIRASMSEGSGRCTPKTI 1233
            ||.||.|: |.|.:|     ||....|||.|   |....::.|::.:.:...             
Zfish   368 SPESACTTVANADAS-----AACNPSRPSKPLCSVQSFELKPEKIDQTLEVL------------- 414

  Fly  1234 TFFKGPGLKSLGFSIVGGRDSPKGNMG---------IFVKTVFPSGQAADDGTLQA---GDEIVE 1286
                  |||.....::..|:..:.|.|         ...|.:|......|.....|   .|:::|
Zfish   415 ------GLKPADSQVLTLRERLRLNAGGTVAYGDFDTVTKELFKQPSKLDSEQEVARLTSDDLIE 473

  Fly  1287 INGNSVQGMSHAETIGLFKNVR----EGTIVLKILRRKLQKAKSM 1327
            ...|....:|.::.:...:.:|    |....||.|:.||.:::|:
Zfish   474 SPSNPTPSLSDSDDLDEMERLRKEHIEALRELKGLQDKLAESESL 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aNP_524641.1 PDZ_canonical <815..868 CDD:483948 20/52 (38%)
PDZ3_PDZD2-PDZ1_hPro-IL-16-like 1231..1316 CDD:467240 17/100 (17%)
stxbp4XP_009305073.1 PDZ1_GgSTXBP4-like 36..123 CDD:467179 21/63 (33%)
PDZ1_hSTXBP4-PDZ2_GgSTXBP4-like 199..286 CDD:467184 13/93 (14%)
Herpes_U47 <298..>424 CDD:283192 38/193 (20%)
SMC_prok_B <405..>608 CDD:274008 23/133 (17%)
WW 695..724 CDD:459800
Blue background indicates that the domain is not in the aligned region.

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