DRSC/TRiP Functional Genomics Resources

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Protein Alignment a and stxbp4

DIOPT Version :9

Sequence 1:NP_001014543.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster
Sequence 2:XP_009305072.1 Gene:stxbp4 / 567916 ZFINID:ZDB-GENE-110420-5 Length:749 Species:Danio rerio


Alignment Length:565 Identity:113/565 - (20%)
Similarity:204/565 - (36%) Gaps:146/565 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   804 QQYRYLIVELEPYGMAQKDGRLRLGDEIVNVNGKHLRGIQSFAEVQRLLSSFVDNCIDLVIAHDE 868
            :::...|..:.|.|:|.:|||||.||.|::||..:|||:.:...|:.|..:...|.:.|::..|:
Zfish    59 EEFGIFIKRILPGGVAAQDGRLRPGDLILDVNNMNLRGVTNEKAVEVLRMASATNHMSLLVVRDD 123

  Fly   869 VTTVTDFYTKIRIDGMSTQRHRLSYVQRTQSTDSLSSMQSLQLQQERIQGHNTEQEQEAQGEDQC 933
                            :::|.....:::..|:.|.||            |.:|........:...
Zfish   124 ----------------ASRREFTELMEKYGSSSSTSS------------GSDTSVSTGKMTDTAS 160

  Fly   934 DARSMASVSTM------PTPMPLMQHRRSSTPRHSLDV---------GAPEHELLRRRARSSSGQ 983
            .:.|..|.|.:      |:|:.......|.:|:...|.         |.....::|..|..:.| 
Zfish   161 SSSSSRSTSPLLLSPKEPSPVYTTACINSPSPQVCTDCMIQLICVAKGTGLGLVIRGGANRAEG- 224

  Fly   984 RSLALTPTPLFASGSSSCSSSPNHRLLDNENDPANDTDSYTPVYANRAASVCVASSLADDEKWQL 1048
                  |...............:.||...:...:.:.:|...|....|.|:...:.|..|...::
Zfish   225 ------PMVFVQEIIQGGDCQKDGRLKSGDQLISINKESLVGVTHEEAKSILTRTKLRPDPTVEI 283

  Fly  1049 -LARKRCSEGSALSATPNPQQFGQRTHYARNSINL---ANSHYRSLRFAHSRLSSSRLSLFMQAP 1109
             ..|:|.|.||  |:.|:            :.|:|   .::::.:.:...|.||.:.|       
Zfish   284 AFIRRRSSSGS--SSGPH------------SPISLQPSCSTNHPAPQTKPSGLSGAAL------- 327

  Fly  1110 PNSLTVGEGVANTPSSTATT--TTDLTNQQQQQQNQQQTHQSLYIKHSPKSVSLFSPNPYVNASS 1172
            |..|.  ..:||||:|.:.|  :.:||                       .|...:..|.:...:
Zfish   328 PGGLV--PKIANTPNSGSETLPSVELT-----------------------KVRAATGKPVLAPVT 367

  Fly  1173 SPASASTS-AGAGSSLAPPAAALMHHRPSLP---VAKLTIRDEEMAEVIRASMSEGSGRCTPKTI 1233
            ||.||.|: |.|.:|     ||....|||.|   |....::.|::.:.:...             
Zfish   368 SPESACTTVANADAS-----AACNPSRPSKPLCSVQSFELKPEKIDQTLEVL------------- 414

  Fly  1234 TFFKGPGLKSLGFSIVGGRDSPKGNMG---------IFVKTVFPSGQAADDGTLQA---GDEIVE 1286
                  |||.....::..|:..:.|.|         ...|.:|......|.....|   .|:::|
Zfish   415 ------GLKPADSQVLTLRERLRLNAGGTVAYGDFDTVTKELFKQPSKLDSEQEVARLTSDDLIE 473

  Fly  1287 INGNSVQGMSHAETIGLFKNVR----EGTIVLKILRRKLQKAKSM 1327
            ...|....:|.::.:...:.:|    |....||.|:.||.:::|:
Zfish   474 SPSNPTPSLSDSDDLDEMERLRKEHIEALRELKGLQDKLAESESL 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aNP_001014543.1 PDZ_signaling 775..865 CDD:238492 21/60 (35%)
PDZ_signaling 1230..1317 CDD:238492 18/102 (18%)
stxbp4XP_009305072.1 PDZ_signaling 40..120 CDD:238492 21/60 (35%)
PDZ_signaling 207..274 CDD:238492 11/73 (15%)
RILP-like 486..585 CDD:304877 8/33 (24%)
WW 695..724 CDD:278809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19964
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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