DRSC/TRiP Functional Genomics Resources

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Protein Alignment a and Tamalin

DIOPT Version :9

Sequence 1:NP_001014543.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster
Sequence 2:NP_062391.3 Gene:Tamalin / 56149 MGIID:1860303 Length:392 Species:Mus musculus


Alignment Length:206 Identity:60/206 - (29%)
Similarity:85/206 - (41%) Gaps:42/206 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1153 KHSPKSVSLFSPNPYVNASSSPASASTSAGAGSSLAPPAAALMHHRPSLPVAKL--TIRDEEMAE 1215
            |...|..:..:|:|...|..|.|:.:....:|    |||||.   .|..|..:|  .:.|...||
Mouse     8 KLQQKEEATAAPDPAGRAPDSEAARAAPLPSG----PPAAAA---PPGAPGEELYAALEDYHPAE 65

  Fly  1216 VIRA--------SMSEGSG------RCTP----KTITFFKGPGLKSLGFSI----VGGRDSPKGN 1258
            :.||        ...:|||      ..:|    |.:|..||.. ::.||.|    :..|:..:..
Mouse    66 LYRALAVSGGTLPRRKGSGFRWKNFTQSPEQQRKVLTLEKGDN-QTFGFEIQTYGLHHREEQRVE 129

  Fly  1259 MGIFVKTVFPSGQAADDGTLQAGDEIVEINGNSVQGMSHAETIGLFK---NVRE-----GTIVLK 1315
            |..||..|..|..|...| |..||.|..:||.:|:|:.|.|.:.:.|   ||..     ||.:.|
Mouse   130 MVTFVCRVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDIIKASGNVLRLETLYGTSIRK 193

  Fly  1316 I-LRRKLQKAK 1325
            . |..:||..|
Mouse   194 AELEARLQYLK 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aNP_001014543.1 PDZ_signaling 775..865 CDD:238492
PDZ_signaling 1230..1317 CDD:238492 32/103 (31%)
TamalinNP_062391.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50 14/48 (29%)
PDZ_signaling 99..184 CDD:238492 28/86 (33%)
Interaction with PSCD3. /evidence=ECO:0000269|PubMed:10828067 180..257 8/25 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..315
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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