DRSC/TRiP Functional Genomics Resources

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Protein Alignment a and PDZK1

DIOPT Version :9

Sequence 1:NP_001014543.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster
Sequence 2:XP_024303384.1 Gene:PDZK1 / 5174 HGNCID:8821 Length:539 Species:Homo sapiens


Alignment Length:88 Identity:27/88 - (30%)
Similarity:45/88 - (51%) Gaps:9/88 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1230 PKTITFFKGPGLKSLGFSIVGGRDSPKGNMGIFVKTVFPSGQAADDGTLQAGDEIVEINGNSVQG 1294
            |:.....|..|  |.|||:    .:.:|..|:::..:.|.|.|...|.| |.|.::|:||.:|:.
Human   153 PRLCYLVKEGG--SYGFSL----KTVQGKKGVYMTDITPQGVAMRAGVL-ADDHLIEVNGENVED 210

  Fly  1295 MSHAETIGLFKNVREGTIVLKIL 1317
            .||.|.:...|  :.|:.|:.:|
Human   211 ASHEEVVEKVK--KSGSRVMFLL 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aNP_001014543.1 PDZ_signaling 775..865 CDD:238492
PDZ_signaling 1230..1317 CDD:238492 26/86 (30%)
PDZK1XP_024303384.1 PDZ_signaling 27..107 CDD:238492
PDZ 152..232 CDD:214570 27/88 (31%)
PDZ_signaling 261..340 CDD:238492
PDZ 395..475 CDD:214570
F1-ATPase_gamma <457..>501 CDD:320933
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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