DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment a and dysc

DIOPT Version :9

Sequence 1:NP_001014543.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster
Sequence 2:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster


Alignment Length:1199 Identity:239/1199 - (19%)
Similarity:367/1199 - (30%) Gaps:427/1199 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 NSLPATEASRNSNSSSNMNGSSNSNSLDVSNSNSHSGSSTSLASTTRNVFTWGKRMSRKLDLLKR 346
            |:..|..||.....|  |.|:.:|:|:....|...||..                       |:.
  Fly    43 NATAAAAASFGLGPS--MGGTQSSSSVPTGGSAGLSGHH-----------------------LRS 82

  Fly   347 SDSPAAAHKSHSDLRSLFH--SPTHHKSGSGGSSGPSSAKASASPTGGHQNSSGST-----TSTL 404
            |.:|..:.....|:...|.  ||   ..|||...| |||.|..|..|   ||:.|.     .|.|
  Fly    83 SGAPGPSSFEAEDIGMAFGMISP---PPGSGPYVG-SSAAAGGSRVG---NSTSSLRGAGGRSGL 140

  Fly   405 KKCKSGPIETIKQRHQQQQQQQQSVQDVGTGQSQSAQSTPTHQFQAAARPQKALKNFFHRIGSTG 469
            .....|...||.:|                      ..:|.:.|.:|..|.|.           |
  Fly   141 YYSPPGTSYTIVER----------------------PHSPHYYFNSAGVPTKG-----------G 172

  Fly   470 MLNHRSHNLLKASEAAQQATPAATTLYRSSSTSQLSSSSYVKCDDPTEGLNLQREQREQRLPRIA 534
            .|..|....|.:|.|:..|...|.||..|::.|..|...:..    :.|...:....||.|....
  Fly   173 SLPGRGSAYLSSSPASHMAAGTAGTLPTSTAASGRSMGQHAS----SNGNKKRPISPEQVLRMFG 233

  Fly   535 SLKSSSCDDIAKVSSCLTASTSSGSAAGSLGSPPSSAAAGGGGTANSGQHDPSRRGAFPYAFLRS 599
            :.:|||.                         |.||.....|||     .|..|.|.      ||
  Fly   234 ATQSSSV-------------------------PTSSYHYSNGGT-----RDRDRTGR------RS 262

  Fly   600 RLSVLPEENHGNVPGHLKQQIQRQREQHQQHQRDLLQQEQTSSPLPQRRSPEQAMLNNVSRNDSI 664
            ..|..|...|         ||.|.||:    :||             |..|.   ::.::.....
  Fly   263 PASSPPSTTH---------QIYRDRER----ERD-------------RSVPN---IHELTTRTVS 298

  Fly   665 TSKDWEPLYQRLSSCLSSNESGYDSDGGATGARLGNN-----LSISGGDTESIASGT-------- 716
            .|:| :.:......|:   :.|.||..|...:|:..|     ..:..|||....:||        
  Fly   299 MSRD-QQIDHGFGICV---KGGKDSGLGVYISRIEENSVAERAGLRPGDTILEVNGTPFTSINHE 359

  Fly   717 --LKRNSLISLSSSEGVGM---------------GMG---------------------------- 736
              |||...| |.||..:.|               |.|                            
  Fly   360 EALKRCVQI-LKSSRQISMTVRAPPTLNSTAPLHGFGPPSRDPMYASMAPPLHPQNQAAAAAAAA 423

  Fly   737 MSLGLGAP-------STRNSSICSAPVSLGGYNYDYETETIRRRFRQVKLERKCQEDYIGIVLSP 794
            .:.|.|.|       ..|:....|.|:..||          ||..|:.::.|      :.:::.|
  Fly   424 AASGAGLPFRQTCSWMDRHGRPASPPMEYGG----------RRSERRDRIRR------VELLIEP 472

  Fly   795 ----KTVMTNSNEQQYRYLIVELEPYGMAQKDGRLRLGDEIVNVNGKHLRGIQSFAEVQRLLSSF 855
                ..::....|......:..::...:|.:.| |.:||||:.|||      |||.:|..     
  Fly   473 GQSLGLMIRGGVEYGLGIFVTGVDKDSVADRSG-LMIGDEILEVNG------QSFLDVTH----- 525

  Fly   856 VDNCIDLVIAHDEVTTVT------------------DFY----TKIRIDG-MSTQ---------- 887
             |..:..:..|..::.|.                  |.|    |:.|..| ::|.          
  Fly   526 -DEAVGQLKYHKRMSLVIRDVGKVPHSCTSIEMEPWDAYSPTGTRARRKGQIATMVEEKARSLLP 589

  Fly   888 RHR---LSYVQRTQSTDSLSSMQSLQLQQERIQGHN-----TEQEQEAQGEDQCDARSMASVSTM 944
            ||.   |||.....|..:::....:.:..|.:..:.     ||..:....||:.....:. ....
  Fly   590 RHHFASLSYYIAEYSAKAMTIDAFVAVLLEMLDTYEKHTLVTEIRELVFPEDRTRYDELV-YRRE 653

  Fly   945 PTPMPLMQHRRSSTPRHSLDVGAPEHELLRRRARSSSGQRSLALTPTPLFASGSSSCSSSPN--- 1006
            ..|..:.:|||...|...|.|.|.:.|::....||.|....|.:|.|.::...:......|.   
  Fly   654 RDPYSVDRHRRKGDPARDLPVTADDLEIIAATGRSPSSDSGLGMTVTDIYKRPALQLPHRPMSAG 718

  Fly  1007 ---HRLLDNENDPANDTDSYTPVYANRAASVCVASSLADDEKWQLLARKRCSEGSALSATPNPQQ 1068
               ||     :.||    |:....:|:::|                           |.:|..||
  Fly   719 PILHR-----SQPA----SHYQTGSNQSSS---------------------------SLSPPQQQ 747

  Fly  1069 FGQRTHYARNSINLANSHYRSLRFA-------------HSRLSSSRLSLFMQAPPNSLTVGEGVA 1120
            ..|:.||        ..|:.|||..             |..|..|:|. |.|             
  Fly   748 QQQQQHY--------QPHHASLRHLGGIGGNVGSGRHHHHPLGPSQLK-FRQ------------- 790

  Fly  1121 NTPSSTATTTTDLTNQQQQQQNQQQTHQSLYIKHSPKSVSLFSPNPYVNASSSPASASTSAGAGS 1185
                         |...|||:.....|::.  :.|...:..:.|:.....::..:.:......|.
  Fly   791 -------------TKDNQQQEYGCDEHRTR--RGSETLLPEYEPDAEQELATKLSRSFDMKEEGG 840

  Fly  1186 SLAPPAAALMHHRPSLPVAKLTIRDEEMAEVIRASMSEGSGRCTPKT----------------IT 1234
            :|........|.                 .:.|.|..:..|..|.:|                ||
  Fly   841 TLLGDKGVRRHQ-----------------SMQRLSAEQNGGSTTEQTHEHNPNVVPDHRGNLHIT 888

  Fly  1235 FFKGPGLKSLGFSIVGGRDS----PKGNMGIFVKTVFPSGQAADDGTLQAGDEIVEINGNSVQGM 1295
            ..|...:  ||.:|.||.::    |:      :..:..:|.|.:.|.|:.|..|:|::|..|:|:
  Fly   889 VKKTKPI--LGIAIEGGANTKHPLPR------IINIHENGAAFEAGGLEVGQLILEVDGTKVEGL 945

  Fly  1296 SHAETIGL----FKNVREGTIVLKILRRK 1320
            .|.|...|    |.|..:..|...::..|
  Fly   946 HHQEVARLIAECFANREKAEITFLVVEAK 974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aNP_001014543.1 PDZ_signaling 775..865 CDD:238492 19/93 (20%)
PDZ_signaling 1230..1317 CDD:238492 26/110 (24%)
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 22/90 (24%)
PDZ_signaling 466..543 CDD:238492 19/89 (21%)
HN_L-whirlin_R2_like 573..653 CDD:259823 13/80 (16%)
PDZ_signaling 886..971 CDD:238492 25/92 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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