Protein Alignment a and Gopc

DIOPT Version :9

• Sequence 1: NP_001014543.1
• Gene: a / 43852
• FlyBaseID: FBgn0000008
• Length: 1329
• Species: Drosophila melanogaster
• Sequence 2: NP_001101101.2
• Gene: Gopc / 309774
• RGDID: 1309512
• Length: 463
• Species: Rattus norvegicus
• Alignment Length: 613
• Identity: 108/613 - (17%)
• Similarity: 181/613 - (29%)
• Gaps: 272/613 - (44%)

  Fly   733 MGMGMSLGLGAPSTRNSSICSAPVSLGGYNYDYETETIRRRFRQVK-LERKCQEDYIGIVLSPKT 796
            |..|.....||.|....:.|...||.||.:          .||.:: ||::..:.::.:.|
  Rat     1 MSAGGPCPAGAGSGPGGASCPVGVSPGGVS----------MFRWLEVLEKEFDKAFVDVDL---- 51

  Fly   797 VMTNSNEQQYRYLIVELEPYGMAQKD----GRLRL-------------GDEIVNVNGKHLRGIQS 844
                        |:.|::|   .|.|    ||.::             ...:..:|.|      .
  Rat    52 ------------LLGEIDP---DQADITYEGRQKMTSLSSCFAQLCHKAQTVSQINHK------L 95

  Fly   845 FAEVQRLLSSFVDNCIDLVI----AHDEVTTVTDFYTKIRIDGMSTQRHRLSYVQRTQSTDSLS- 904
            .|::..|.|...:...:.|:    .||::         :::.....|.|    .:..||.||.:
  Rat    96 EAQLVDLRSELTETQAEKVVLEKEVHDQL---------LQLHSTQLQLH----AKTGQSVDSGAI 147

  Fly   905 ----SMQSLQLQQERIQGHNTEQEQEAQGEDQCDARSMASVSTMPTPMPLMQHRRSSTPRHSLDV 965
                |:.|::..:..::.:.||:.:||:.|        |.|..:
  Rat   148 KAKLSVHSMEDLERELEANKTEKVKEARLE--------AEVKLL--------------------- 183

  Fly   966 GAPEHELLRRRARSSSGQRSLALTPTPLFASGSSSCSSSPNHRLLDNENDPANDTDSYTPVYANR 1030
             ..|:|.|||.         :|:....::.:..::       :.||.|             .|.|
  Rat   184 -RKENEALRRH---------IAVLQAEVYGARLAA-------KYLDKE-------------LAGR 218

  Fly  1031 AASVCVASSLADDEKWQLLARKRCSEGSALSATPNPQQFGQRTHYARNSINLANSHYRSLRFAHS 1095
            ...:            |||.|.  .:|.|.....|  |.....|..|        |...:|....
  Rat   219 VQQI------------QLLGRD--MKGPAHDKLWN--QLEAEIHLHR--------HKTVIRACRG 259

  Fly  1096 RLSSSRLSLFMQAPPNSLTVGEGVANTPSSTATTTTDLTNQQQQQQNQQQTHQSLYIKHSPKSVS 1160
            |....|.   |||||.                                          |...|:
  Rat   260 RQDLKRP---MQAPPG------------------------------------------HDQDSL- 278

  Fly  1161 LFSPNPYVNASSSPASASTSAGAGSSLAPPAAALMHHRPSLPVAKLTIRDEEMAEVIRASMSEGS 1225
                             ..|.|.|                 |:.|:.:..|:         .||
  Rat   279 -----------------KKSQGVG-----------------PIRKVLLLKED---------HEG- 299

  Fly  1226 GRCTPKTITFFKGPGLKSLGFSIVGGRDSPKGNMGIFVKTVFPSGQAADD-GTLQAGDEIVEING 1289
                              ||.||.||::.   .:.|.:..:.| ||.||. |.|..||.::.:||
  Rat   300 ------------------LGISITGGKEH---GVPILISEIHP-GQPADRCGGLHVGDAVLAVNG 342

  Fly  1290 NSVQGMSHAETIGLFKNVREGTIVLKIL 1317
            .:::...|.|.:.:....| |.|..:::
  Rat   343 VNLRDTKHKEAVTILSQQR-GEIEFEVV 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
a	NP_001014543.1	PDZ_signaling	775..865	CDD:238492	17/111 (15%)
		PDZ_signaling	1230..1317	CDD:238492	23/87 (26%)
Gopc	NP_001101101.2	SMC_prok_B	<35..>215	CDD:274008	42/276 (15%)
		PDZ_signaling	287..369	CDD:238492	27/114 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3528
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900