Sequence 1: | NP_001014543.1 | Gene: | a / 43852 | FlyBaseID: | FBgn0000008 | Length: | 1329 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006238402.1 | Gene: | Mpdz / 29365 | RGDID: | 3105 | Length: | 2068 | Species: | Rattus norvegicus |
Alignment Length: | 1724 | Identity: | 338/1724 - (19%) |
---|---|---|---|
Similarity: | 568/1724 - (32%) | Gaps: | 585/1724 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 YSTLAAQQQQQQQQQQQ-------HQAEGSN----ISHSSNSSSNKSHTPATCSNRLNKSIVSST 66
Fly 67 S---ISSSLPDLHDKSPVMILSCTTLASNGATATAAVTATATGTAATSGGSLQQQQQQHLQHQQQ 128
Fly 129 QQPLRTATPTCLLSGRQT--PSAISVMSLQEATSLHRQQ--QQPHQPPTIYVPVPTKLGNNVNTG 189
Fly 190 NSSATLLLSYGSTSSIANLQQQQQQHAAQYQQYVAQRLHAASSSCLYEKGSNASG---------- 244
Fly 245 -GASSNKSSLSLTPNGHL-PDYKLVTAMPVVVLDDEHKSNSL--PATEASRNSNSSSNMNGSSNS 305
Fly 306 NSLDVSNSNSHSGSSTSLAS--TTRNVFTWGKRMSR-KLDLLKRSDSPAAAHKSHSDLRSLFHSP 367
Fly 368 --------------THHKSGSGGSS-GPSSAKASASPTGGHQNSSGSTTSTLKKCKSGPIETIKQ 417
Fly 418 RHQQQQQQQQSVQDVGTG---QSQSAQSTPTHQFQAAA--------RPQKALKNFFHRIGSTGML 471
Fly 472 NHRSHNLLKASEAAQQATPAATTLYRSSSTSQLSSSSYVKCDDPTEGLNLQREQREQRLPRIASL 536
Fly 537 KSSSCDDIAKVSSCLTASTSSGSAAGSLGSPPSSAAAGGG----GTANSG--------QHDPSRR 589
Fly 590 GAFPYAFLRSRLSVLPEENHGNVPGHLK-----------QQIQRQREQHQQHQRDLLQQEQTSS- 642
Fly 643 ------PLPQRR--SPEQAMLNNVSRNDSITSKDW-EP----LYQRLSSCLSSNESGYDSDGGAT 694
Fly 695 GARLGNNLSISG-------GDTESIASGTLKRNSLI----------------------------- 723
Fly 724 -------------------------SLSSSEGVGMGMGMSLGLGAPS-----TRNSSICSAPVSL 758
Fly 759 GGY------------------------NYDYETETIRRRF-------RQVKLERKCQEDYIGIVL 792
Fly 793 SPKTVMTNSNEQQYRYLIVELEPYGMAQKDGRLRLGDEIVNVNGKHL--RGIQSFAEVQRLLSS- 854
Fly 855 ----FVDNCIDLV--------IAHDEVTTVTDFYTKIRIDGMSTQRHRL--SYVQRTQSTD--SL 903
Fly 904 SSMQSLQL------------QQERIQGHNTEQEQEAQGE---------DQCDARSMASVSTMPTP 947
Fly 948 --MPLMQHRRSSTPRHSLDVGA--PEHELLRRRARSSSGQR------------------SLALTP 990
Fly 991 TP-LFASGSSSCSSSPN-------------------------------HRLLDN----------- 1012
Fly 1013 ---------------ENDPANDTDSYTP------VYANRA----ASVCVASSLADDEKWQLLARK 1052
Fly 1053 RCSEGSALSATPNPQQFGQRTHYARNSINLANSHYRSLRFAHSRLSSSRLSLFMQAPPNSLTVGE 1117
Fly 1118 GVANTPS---------STATTTTDL--------TNQQQQQQNQQQTHQSLY--------IKHSPK 1157
Fly 1158 SVSLFSPNPY---------VNASSSPASA---STSAGAGSSL--APPAAALMH------------ 1196
Fly 1197 -----------------HRPSLPVAK------------------LTIRDEEMAEVIRASMSEGSG 1226
Fly 1227 RCTP--------KTITFFKGPGLKSLGFSIVGGRDSPKGNMGIFVKTVFPSGQAADDGTLQAGDE 1283
Fly 1284 IVEINGNSVQGMSHAETIGLFKNVREGTIVLKIL 1317 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
a | NP_001014543.1 | PDZ_signaling | 775..865 | CDD:238492 | 27/104 (26%) |
PDZ_signaling | 1230..1317 | CDD:238492 | 43/94 (46%) | ||
Mpdz | XP_006238402.1 | L27_2 | 6..63 | CDD:117611 | |
PDZ_signaling | 140..222 | CDD:238492 | |||
PDZ_signaling | 256..335 | CDD:238492 | |||
PDZ | 374..463 | CDD:214570 | |||
PDZ_signaling | 552..621 | CDD:238492 | 13/95 (14%) | ||
PDZ_signaling | 693..776 | CDD:238492 | 20/82 (24%) | ||
PDZ_signaling | 993..1063 | CDD:238492 | 19/79 (24%) | ||
PDZ_signaling | 1150..1241 | CDD:238492 | 17/94 (18%) | ||
PDZ | 1348..1433 | CDD:214570 | 24/91 (26%) | ||
PDZ_signaling | 1482..1561 | CDD:238492 | 11/81 (14%) | ||
MPDZ_u10 | 1563..1624 | CDD:293272 | 14/60 (23%) | ||
PDZ | 1625..1709 | CDD:214570 | 6/83 (7%) | ||
PDZ_signaling | 1721..1801 | CDD:238492 | 19/96 (20%) | ||
PDZ_signaling | 1858..1943 | CDD:238492 | 15/84 (18%) | ||
PDZ_signaling | 1984..2067 | CDD:238492 | 42/85 (49%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR19964 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |