DRSC/TRiP Functional Genomics Resources

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Protein Alignment a and F20D6.1

DIOPT Version :9

Sequence 1:NP_001014543.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster
Sequence 2:NP_505110.2 Gene:F20D6.1 / 184722 WormBaseID:WBGene00017633 Length:180 Species:Caenorhabditis elegans


Alignment Length:159 Identity:34/159 - (21%)
Similarity:60/159 - (37%) Gaps:35/159 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   785 EDYIGIVLSPKTVMT-NSNEQQYRYL------IVELEPYGMAQKDGRLRLG---DEIVNV---NG 836
            :.|..:|....|..| .|..:::.||      |.:.|...:......||.|   :.:|.:   ..
 Worm    20 KSYQNVVYVESTDNTWGSTTRRFLYLGDAILRIDDTEILDLPTTQNALRTGFSKNGVVTIIVERA 84

  Fly   837 KH------LRGIQSFAEV--QRLLSSFVDNCIDLVIAHD-----EVTTVTDFYTKIRIDGMSTQR 888
            .|      :|.:..|::|  ..|....:..|...:..|:     |.|.:...|||   |..|..|
 Worm    85 VHQESYAFVRSVMGFSKVLDPMLPQDVIQTCTARLAYHNKHGFAEPTPIFKGYTK---DYSSAGR 146

  Fly   889 HRLSYVQRTQSTDSLSSMQSLQLQQERIQ 917
            ..::      :|..:.|:::.||..|.:|
 Worm   147 VSVT------NTVEIKSIRTEQLNPEILQ 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aNP_001014543.1 PDZ_signaling 775..865 CDD:238492 19/100 (19%)
PDZ_signaling 1230..1317 CDD:238492
F20D6.1NP_505110.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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