DRSC/TRiP Functional Genomics Resources

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Protein Alignment a and C46H11.6

DIOPT Version :9

Sequence 1:NP_001014543.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster
Sequence 2:NP_491502.1 Gene:C46H11.6 / 183523 WormBaseID:WBGene00016730 Length:342 Species:Caenorhabditis elegans


Alignment Length:334 Identity:56/334 - (16%)
Similarity:115/334 - (34%) Gaps:99/334 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   697 RLGNNLSISGGDTESIASGTLKRNSLISLSSSEGVGMGMGMSLGLGAPSTRNSSICSAPVSLGGY 761
            |:..|..:|...|.|..:|.:..:.::.::.:.|                 |.|           
 Worm    50 RINENSMVSFLSTNSFYNGLILSDKIVKVNGASG-----------------NIS----------- 86

  Fly   762 NYDYETETIRRRFRQVKLERK---------------C--QEDYIGIVLSPK--------TVMTNS 801
              .|:||.::.....|::.|:               |  :.|....|:..:        ||....
 Worm    87 --KYQTELMKGETCSVEVTRRKNIIPATRERLKKSGCVLRRDNTCFVIEVEKTSAMKSATVGVTV 149

  Fly   802 NEQQYRYLIVELEPYGMAQ-KDGRLRLGDEIVNVNGKHLRGIQSFAEVQRLLSSFVDNCIDLVIA 865
            ...|.|.::..:||..:|. ..||   ||.|:::|.:.:...:.       ...|:...:..::.
 Worm   150 TYIQKRGIVTRIEPSSLASIFFGR---GDLIMDINEESILNAEK-------NDDFIREKLSGILK 204

  Fly   866 HDEVTTVTDFYTKIRIDGMSTQRHRLSYVQ---------------RTQSTDSLSSMQSLQ----L 911
            .::||.:.:  ..:.::..:|.||.:..|.               |..|....:.::.||    |
 Worm   205 GEKVTFLVE--RPVSVESANTLRHLIESVAPDPDVKMANDAICIGRNASNMHYNVLKKLQPKSIL 267

  Fly   912 QQERIQGHNTEQEQEAQGEDQCDARSMASVSTMPTPMPLMQHRRSSTPRHSLDVGAPEHELLRRR 976
            .::..:|.|..:::..:...: :..:...:||           .:||...|.||...|.:.|:..
 Worm   268 SRDVFKGKNPREKKPGKKLSK-EKDNTIKIST-----------ATSTANISTDVAEDEIDNLKNV 320

  Fly   977 ARSSSGQRS 985
            ...|...||
 Worm   321 VTKSHAVRS 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aNP_001014543.1 PDZ_signaling 775..865 CDD:238492 19/115 (17%)
PDZ_signaling 1230..1317 CDD:238492
C46H11.6NP_491502.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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