DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment a and XB5786944

DIOPT Version :10

Sequence 1:NP_524641.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster
Sequence 2:XP_004916893.1 Gene:XB5786944 / 100494793 XenbaseID:XB-GENE-5786945 Length:682 Species:Xenopus tropicalis


Alignment Length:913 Identity:172/913 - (18%)
Similarity:281/913 - (30%) Gaps:354/913 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 KALKNFFHRIGSTGMLN--------HRS----HNLL-KASEAAQQATPAATTLYRSSSTSQLSS- 506
            :.||||........|..        |||    .||| |.|.:....|.....:.|....:.|.: 
 Frog    66 RCLKNFLQEKDFCPMDRKKLCFQDCHRSSLLVRNLLDKLSVSCPFLTDCKQVMQRCELDAHLKNR 130

  Fly   507 -SSYVKCDDPTEGLNL-----QREQREQR-LPRIASLKSSSCDDIAKVSSCLTASTSSGSAAGSL 564
             ..:.||....|..|.     :..|..|| ||:.:.:.|...:      |.|.|..|.|::...|
 Frog   131 CQGFRKCRPVKEKTNATICLRKNAQDGQRDLPQTSGISSVIAE------SSLAAVVSLGTSEPGL 189

  Fly   565 GSPPSSAAAGGGGTANSGQHDPSRRGAFPYAFLRSRLSVLPEENHGNVPGHLKQQIQRQREQHQQ 629
            .:|...            :||....|..|     .|.|:|.|.:...:                 
 Frog   190 VNPAFD------------EHDDDDDGDLP-----QRTSLLAETSTVEI----------------- 220

  Fly   630 HQRDLLQQEQTSSPLPQR-RSPEQAMLNNVSRNDSITSKDWEPLYQRLSSCLSSNESGYDSDGGA 693
            |:.|      ..:||..| ...:...|.|:...:.:|                  :|...:||..
 Frog   221 HRVD------PENPLGMRIVGGKDTPLGNIVVQEILT------------------DSLVATDGKV 261

  Fly   694 T-GARL----GNNLSISGGDTESIASGTLKRN-SLISLSSSEGVGMGMGMSLGLGAPSTRNSSIC 752
            | |..:    |.|:|   ..|.|.|...|::. |::.|:        :....|....|:|..:  
 Frog   262 TPGDHILEVNGTNIS---NVTHSQAIALLRQPCSVLQLT--------LVQEKGFSPQSSRTEN-- 313

  Fly   753 SAPVSLGGYNYDYETETIRRRFRQVKLERKCQEDYIGIVLSPKTVMTNSNEQQYRYLIVELEPYG 817
                |.||  ..:.|:.|     ||.|.::.:.:.:||.|..||       ::....:::|...|
 Frog   314 ----STGG--SPHSTKVI-----QVTLTKRDRSEPLGIKLVRKT-------EEPGIFVLDLLDGG 360

  Fly   818 MAQKDGRLRLGDEIVNVNGKHLRGIQSFAEVQRLLSSFVDNCIDLVIAHDEVTTVTDFYTKIRID 882
            :|.|||||:..|:::::||.:|:                         |....|....       
 Frog   361 LAYKDGRLKCNDKVLSINGHNLK-------------------------HGTPETAAQI------- 393

  Fly   883 GMSTQRHRLSYVQRTQSTDSLSSMQSLQLQQERIQGHNTEQEQEAQGEDQCDARSMASVSTMPTP 947
             :.:...|:::|                     :..|..:|..:...|......|.......|..
 Frog   394 -IQSSEARVNFV---------------------VLRHMIDQPVDINEESSSSGSSNGGSPVHPRK 436

  Fly   948 MP-LMQHRRSSTPRHSLDVGAPEHELLRRRARSSSGQRSLALTPTPLFASGSSSCSSSPNHRLLD 1011
            .| |..:||.||....::.|.|:||                                        
 Frog   437 RPSLRPNRRKSTHHKDVNPGPPDHE---------------------------------------- 461

  Fly  1012 NENDPANDTDSYTPVYANRAASVCVASSLADDEKWQLLARKRCSEGSALSATPNPQQFGQRTHYA 1076
                                                                             
 Frog   462 ----------------------------------------------------------------- 461

  Fly  1077 RNSINLANSHYRSLRFAHSRLSSSRLSLFMQAPPNSLTVGEGVANTPSSTATTTTDLTNQQQQQQ 1141
             .|:|:....|.||                     .:|:|.|            .||.|:     
 Frog   462 -KSVNVKKEQYESL---------------------GITIGGG------------RDLKNK----- 487

  Fly  1142 NQQQTHQSLYIKHSPKSVSLF------SPNPYVNASSSPASASTSAGAGSSLAPPAAALMHHRPS 1200
                  ..:|:........||      ..:..::.:.:..::.:.:.|.|:|...||:   |...
 Frog   488 ------LPIYVSSIQPVGCLFRDGRIRKGDVLLSINGTDLTSLSYSDAISALKTNAAS---HTVV 543

  Fly  1201 LPVAKLTI--RDEEMAEVIRASMSEGSGRCTPKTITFFKGP--------------GLKSLGFSIV 1249
            |...::|:  |.:|..|.......|..|..:|..:.:...|              ..:|.|||||
 Frog   544 LKALEVTVGERLDEPVEHAAGVTREPGGIWSPLWVYWLALPSSLHWCRHITLRKTSSESWGFSIV 608

  Fly  1250 GGRDSPKGNMGIFVKTVFPSGQAADDGTLQAGDEIVEINGNSVQGMSHAETIGLFKNVREGTIVL 1314
            ||.:..||:...|:||:.|...|..|..|:.||||||:||.|..|||:|:.|.:.|. ::..:.|
 Frog   609 GGFEEGKGDQPFFIKTIVPGTPAFYDKRLKCGDEIVEVNGVSAVGMSNAQLIPMLKE-QKNRVTL 672

  Fly  1315 KIL 1317
            .::
 Frog   673 TVV 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aNP_524641.1 PDZ_canonical <815..868 CDD:483948 12/52 (23%)
PDZ3_PDZD2-PDZ1_hPro-IL-16-like 1231..1316 CDD:467240 34/98 (35%)
XB5786944XP_004916893.1 mRING-HC-C3HC3D_LNX2 39..83 CDD:319694 5/16 (31%)
PDZ1_LNX1_2-like 213..301 CDD:467165 23/139 (17%)
PDZ2_LNX1_2-like 325..407 CDD:467166 25/147 (17%)
PDZ3_LNX1_2-like 462..548 CDD:467167 21/132 (16%)
PDZ4_LNX1_2-like 593..679 CDD:467168 33/84 (39%)

Return to query results.
Submit another query.