DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox102F and Tfam

DIOPT Version :10

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_112616.2 Gene:Tfam / 83474 RGDID:620682 Length:244 Species:Rattus norvegicus


Alignment Length:100 Identity:21/100 - (21%)
Similarity:49/100 - (49%) Gaps:1/100 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   424 KRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHP 488
            |:||::::.::.::..|.....||...|.:.:.:.|.|:.:..|:|:.|..:.....|::.|...
  Rat    50 KKPMSSYLRFSTEQLPKFKAKHPDAKVSELIRKIAAMWRELPEAEKKVYEADFKAEWKVYKEAVS 114

  Fly   489 DYRYRPRPKRTCIVDGKKMRISEYKVLMRNRRAEM 523
            .|:.:..|.:...:: |:.|....|...:.:|.|:
  Rat   115 KYKEQLTPSQLMGLE-KEARQKRLKKKAQIKRREL 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 HMG-box_EGL13-like 421..498 CDD:438848 16/73 (22%)
TfamNP_112616.2 HMG_box 49..116 CDD:459837 14/65 (22%)
HMG-box_SF 134..232 CDD:469606 3/14 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..244
Blue background indicates that the domain is not in the aligned region.

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