Protein Alignment Sox102F and HMGB6

DIOPT Version :10

• Sequence 1: NP_001014695.1
• Gene: Sox102F / 43844
• FlyBaseID: FBgn0039938
• Length: 618
• Species: Drosophila melanogaster
• Sequence 2: NP_568431.1
• Gene: HMGB6 / 832408
• AraportID: AT5G23420
• Length: 241
• Species: Arabidopsis thaliana
• Alignment Length: 195
• Identity: 40/195 - (20%)
• Similarity: 82/195 - (42%)
• Gaps: 40/195 - (20%)

  Fly   298 PSSSPNSSSQRDHCENLTPVVSSPPLSWHQGQPHYAEIELPLLKSHGRVWNSAVACSGGSRATRV 362
            ||::.|:..||...|..|...:|..|                  ...:..::...|.|.:::..|
plant     4 PSTTSNAPKQRKRVEAETSSNTSTTL------------------RRAKDGSAFALCEGCNKSVAV 50

  Fly   363 SRDSVNSCGTNSERSAALDPESLNS-GQLGPVPA--------SPSSQPLRQGNGHGHGGNHGHVH 418
            :..|:::|..:::....|:.:.:.: .:....||        .|..:.|::.|......:   ..
plant    51 ALISMHNCSLDAKIRVNLEAQVVETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSS---TS 112

  Fly   419 SKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNI----SKILGARWKAMSNADKQPYYEEQSRL 479
            :||  |||:.||.::..|.|    |.....||.::    :||.|.:||:::..:|:.|.::.:.|
plant   113 NKP--KRPLTAFFIFMSDFR----KTFKSEHNGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAEL 171

  Fly   480  479
            plant   172  171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox102F	NP_001014695.1	HMG-box_EGL13-like	421..498	CDD:438848	19/63 (30%)
HMGB6	NP_568431.1	HMG-box_AtHMGB1-like	116..175	CDD:438821	18/60 (30%)