Protein Alignment Sox102F and sox18

DIOPT Version :10

• Sequence 1: NP_001014695.1
• Gene: Sox102F / 43844
• FlyBaseID: FBgn0039938
• Length: 618
• Species: Drosophila melanogaster
• Sequence 2: XP_017209261.1
• Gene: sox18 / 797246
• ZFINID: ZDB-GENE-080725-1
• Length: 431
• Species: Danio rerio
• Alignment Length: 291
• Identity: 85/291 - (29%)
• Similarity: 121/291 - (41%)
• Gaps: 87/291 - (29%)

  Fly   347 WNSAVACSGGSRATRVSRDSVNSCGTNSERSAALDPESLNSGQLGPVPAS--------------- 396
            |.::.:..|..|            |...:||        .:.:|.|||.|
Zfish    25 WGASSSTPGPER------------GHGFDRS--------RTTELAPVPGSGTRTVSRTAAEARTG 69

  Fly   397 --PSSQP--LRQGNGHGHGGNHGHVHSKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKIL 457
              .|::|  |..|:..|..|      .:..|:||||||||||||||:::....||:||:.:||:|
Zfish    70 SPDSTRPGALTLGSSEGKSG------GESRIRRPMNAFMVWAKDERKRLAIQNPDLHNAVLSKML 128

  Fly   458 GARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCIVDGKKMRISEYKVLMRNRRAE 522
            |..|||:|..||:|:.||..||...|::.||:|:||||.|:    ..|||:..|..:|::
Zfish   129 GQSWKALSTLDKRPFVEEAERLRLQHLQDHPNYKYRPRRKK----QPKKMKRVEPGLLLQ----- 184

  Fly   523 MRQLWCRTGGVSGGSGSLCADACPKGSGGSNSQVAVAAAAAVYHLQDMASSAASTAHGHDCGHTP 587
                    |...||.|    ||.      |..:.|......:.|.:|:..|.|......  |...
Zfish   185 --------GLAHGGPG----DAY------SPHRHAHHLLPPLGHFRDLHPSGAPELESF--GLPT 229

  Fly   588 PQ-------------QFFYPPESLSPSGFSS 605
            |:             ..|:||......|.||
Zfish   230 PEMSPLDVLEEGGGDSVFFPPHMQEDVGLSS 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox102F	NP_001014695.1	HMG-box_EGL13-like	421..498	CDD:438848	42/76 (55%)
sox18	XP_017209261.1	HMG-box_SoxF_SOX18	91..170	CDD:438851	43/82 (52%)
		Sox17_18_mid	211..261	CDD:463454	11/52 (21%)
		PHA03420	<264..>315	CDD:177648