DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sox102F and SOX15

DIOPT Version :9

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_008873.1 Gene:SOX15 / 6665 HGNCID:11196 Length:233 Species:Homo sapiens


Alignment Length:254 Identity:70/254 - (27%)
Similarity:105/254 - (41%) Gaps:88/254 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 GTNSERSAALDPESLN---SGQLGP-------VPASPSSQPLRQGNGHGHGGNHGHVHSKPHIKR 425
            |::.:::.:|:|.:..   |...||       .||:|.:.||.:                  :||
Human     5 GSSQDQAWSLEPPAATAAASSSSGPQEREGAGSPAAPGTLPLEK------------------VKR 51

  Fly   426 PMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDY 490
            ||||||||:..:||::.:..|.||||.|||.|||:||.:...:|:|:.||..||...|:..:|||
Human    52 PMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRLRARHLRDYPDY 116

  Fly   491 RYRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMRQLWCRTGGVSGGSGSLCADACPKGSGGSNSQ 555
            :||||                       |:|:           |.|:|   ...|.:|.|     
Human   117 KYRPR-----------------------RKAK-----------SSGAG---PSRCGQGRG----- 139

  Fly   556 VAVAAAAAVYHLQDMASSAASTAHGHDCGHTPPQQFFYPPESLS----PSGFSSDEVEL 610
                         ::||.......|: ....|.:.|.|.|.|.|    |..:.|...:|
Human   140 -------------NLASGGPLWGPGY-ATTQPSRGFGYRPPSYSTAYLPGSYGSSHCKL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 SOX-TCF_HMG-box 422..493 CDD:238684 35/70 (50%)
SOX15NP_008873.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48 11/42 (26%)
Required to promote HAND1 transcriptional activator activity. /evidence=ECO:0000250|UniProtKB:P43267 1..47 10/41 (24%)
SOX-TCF_HMG-box 48..119 CDD:238684 35/88 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..153 18/95 (19%)
Interaction with FHL3. /evidence=ECO:0000250|UniProtKB:P43267 138..183 12/63 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 208..233
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148460
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.