DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox102F and SOX10

DIOPT Version :9

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_008872.1 Gene:SOX10 / 6663 HGNCID:11190 Length:466 Species:Homo sapiens


Alignment Length:300 Identity:80/300 - (26%)
Similarity:108/300 - (36%) Gaps:119/300 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 DPESLNSGQLGPVPA------SPSSQP------------LRQGNGHGHGGN-------------- 413
            :.:.|:..:|.||.:      ||.|.|            ||...|.|..|.              
Human     3 EEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQDGEADDDK 67

  Fly   414 ---------------------------HGHVHSKPHIKRPMNAFMVWAKDERRKILKACPDMHNS 451
                                       :|...||||:|||||||||||:..|||:....|.:||:
Human    68 FPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNA 132

  Fly   452 NISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCIVDGKKMRISEYKVLM 516
            .:||.||..|:.::.:||:|:.||..||...|.:.||||:|:||                     
Human   133 ELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPR--------------------- 176

  Fly   517 RNRRAEMRQLWCRTGGVSGGSGSLCADACPKGSGGSNSQVAVAAAAAVY---HL------QDMAS 572
              ||        :.|..:.|...     ||   ||...|...||..|.|   ||      :....
Human   177 --RR--------KNGKAAQGEAE-----CP---GGEAEQGGTAAIQAHYKSAHLDHRHPGEGSPM 223

  Fly   573 SAASTAHGHDCGHTPPQQFFYPPESLSPSGFSSDEVELAS 612
            |..:..|.....|.||.    ||        ::.:.||.|
Human   224 SDGNPEHPSGQSHGPPT----PP--------TTPKTELQS 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 SOX-TCF_HMG-box 422..493 CDD:238684 35/70 (50%)
SOX10NP_008872.1 Sox_N 12..93 CDD:315171 12/80 (15%)
Dimerization (DIM). /evidence=ECO:0000303|PubMed:31194875 62..102 2/39 (5%)
SOX-TCF_HMG-box 103..173 CDD:238684 35/69 (51%)
Nuclear export signal 134..145 5/10 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..199 18/77 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..274 10/51 (20%)
Transactivation domain (TAM). /evidence=ECO:0000303|PubMed:31194875 228..310 8/35 (23%)
Transactivation domain (TAC). /evidence=ECO:0000303|PubMed:31194875 353..466
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 354..375
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 433..466
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..67 13/63 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148461
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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