DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sox102F and LOC5667180

DIOPT Version :10

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:XP_061506759.1 Gene:LOC5667180 / 5667180 VectorBaseID:AGAMI1_013824 Length:717 Species:Anopheles gambiae


Alignment Length:194 Identity:67/194 - (34%)
Similarity:90/194 - (46%) Gaps:44/194 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   418 HSKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKL 482
            ||..|||||||.||||::.|||||.:..|||||:.|||.||.|||.:|..::||:.||..||.||
Mosquito    67 HSPGHIKRPMNPFMVWSQIERRKICEVTPDMHNAVISKNLGQRWKQLSPEERQPFIEEAERLRKL 131

  Fly   483 HMEQHPDYRYRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMRQLWCRTGGVSGGSGSLCADACPK 547
            |.:::|:|:|||:.|:.                              .|..|||:|..   :.||
Mosquito   132 HTQEYPNYKYRPKKKQI------------------------------KGSGSGGAGPA---SSPK 163

  Fly   548 --GSGGSNSQVAVAAAAAVYHLQDMASSAASTAHGHDCGHTPPQQFFYPPESLSPSGFSSDEVE 609
              .|..|:|..:..|.:..........|..|.:....||.:         .|.|.|..||...:
Mosquito   164 NGSSSSSSSSSSTGAGSPALSTSSSTGSPDSVSSRDSCGSS---------SSSSSSSSSSSSAK 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 HMG-box_EGL13-like 421..498 CDD:438848 44/76 (58%)
LOC5667180XP_061506759.1 None

Return to query results.
Submit another query.