DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox102F and sox14

DIOPT Version :9

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_001032769.1 Gene:sox14 / 557661 ZFINID:ZDB-GENE-051113-268 Length:238 Species:Danio rerio


Alignment Length:198 Identity:69/198 - (34%)
Similarity:91/198 - (45%) Gaps:58/198 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   419 SKP--HIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSK 481
            |||  ||||||||||||::.:|||:.:..|.||||.|||.|||.||.:|.::|:||.:|..||..
Zfish     2 SKPADHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRA 66

  Fly   482 LHMEQHPDYRYRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMRQLWCRTGGVSGGSGSLCADACP 546
            .||::||||:||||.|.              |.|::..|.                      ..|
Zfish    67 QHMKEHPDYKYRPRRKP--------------KNLLKKDRY----------------------VFP 95

  Fly   547 KGSGGSNSQVAVAAAAAVYHLQDMASSAASTAHGHDCGHTPPQQFFYPPES-----LSPSGFSSD 606
            ....|...           ||:.:..||..:.    .|.:...:.|.||.|     |.||.|||.
Zfish    96 LPYLGDTD-----------HLKGLPVSATDSL----LGSSEKARAFLPPTSAPYSFLDPSQFSSS 145

  Fly   607 EVE 609
            .::
Zfish   146 AIQ 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 SOX-TCF_HMG-box 422..493 CDD:238684 41/70 (59%)
sox14NP_001032769.1 SOX-TCF_HMG-box 7..78 CDD:238684 41/70 (59%)
SOXp 77..>95 CDD:289133 8/53 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582365
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

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