DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox102F and sox11

DIOPT Version :10

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_001008053.1 Gene:sox11 / 493415 XenbaseID:XB-GENE-483418 Length:383 Species:Xenopus tropicalis


Alignment Length:200 Identity:69/200 - (34%)
Similarity:99/200 - (49%) Gaps:34/200 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 HIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQ 486
            ||||||||||||:|.|||||::..|||||:.|||.||.|||.:::::|.|:..|..||...||..
 Frog    47 HIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKHMAD 111

  Fly   487 HPDYRYRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMRQLWCRTGGVSGGSGSLCADACPKGSGG 551
            :|||:||||.|       .|:..|..|.....:..| :....|:.|          ..|||...|
 Frog   112 YPDYKYRPRKK-------PKVDPSASKPASLAQSPE-KSPKSRSAG----------KKCPKLKPG 158

  Fly   552 SNSQVAVAAAAAVYHLQDMASSAASTAHGHDCGHTPPQQFFYPPESLSPSG---FSSDEVELASQ 613
            |:|..:.::.:|       .|....:.:|.|      ...|..|::.|.:.   |..::.|...:
 Frog   159 SHSGSSSSSGSA-------KSLTIKSEYGGD------DYVFGSPKAASKAAKCVFMDEDDEEEEE 210

  Fly   614 RELDD 618
            .|.:|
 Frog   211 DEEED 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 HMG-box_EGL13-like 421..498 CDD:438848 45/75 (60%)
sox11NP_001008053.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
HMG-box_SoxC_SOX11 37..128 CDD:438846 47/87 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..174 20/83 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..231 3/18 (17%)
Blue background indicates that the domain is not in the aligned region.

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