DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox102F and Sox100B

DIOPT Version :10

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster


Alignment Length:210 Identity:67/210 - (31%)
Similarity:94/210 - (44%) Gaps:36/210 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   420 KPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHM 484
            |.|||||||||||||:..||.:.|..|.:.||.:||.||..||.:.::||:|:.|...:|...|.
  Fly    74 KEHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTHK 138

  Fly   485 EQHPDYRYRPRPKRTCIV----------DGKKMRI-----SEYKVLMRNRRAEMRQLWCRTGGVS 534
            ::||||:|:||.|:..::          .|.:|.:     |..|....|...:.|   ...|..:
  Fly   139 QEHPDYKYQPRRKKARVLPSQQSGEGGSPGPEMTLSATMGSSGKPRSSNSNGQRR---AGKGNAA 200

  Fly   535 GGSGSLCADACPKGSGGSNSQVAVAAAAAVYHLQD------MASSAASTAHGHDCGH-------T 586
            ...|| ||......:.||||....:..|.:..|..      |..|...|.....|..       |
  Fly   201 ADLGS-CASTISHANVGSNSSDVFSNEAFMKSLNSACAASLMEQSLIETGLDSPCSTASSMSSLT 264

  Fly   587 PPQQFFYPPESLSPS 601
            ||.    .|.:::||
  Fly   265 PPA----TPYNVAPS 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 HMG-box_EGL13-like 421..498 CDD:438848 38/76 (50%)
Sox100BNP_651839.1 HMG-box_SoxE 76..150 CDD:438840 37/73 (51%)

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