DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox102F and sox4b

DIOPT Version :10

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_957195.2 Gene:sox4b / 393875 ZFINID:ZDB-GENE-040426-1274 Length:342 Species:Danio rerio


Alignment Length:279 Identity:89/279 - (31%)
Similarity:119/279 - (42%) Gaps:47/279 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 NSERSAALDPESLNSGQL-------GPVPASPSSQPLRQGNGHGHGG---NHGHVH-SKPHIKRP 426
            :|..||..|.:|.:||.|       .|.|.|.:|           ||   |.|... :..|||||
Zfish     5 SSSSSALFDGDSSDSGALDLDAHAASPSPGSTAS-----------GGEKLNPGWCKTASGHIKRP 58

  Fly   427 MNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYR 491
            |||||||::.|||||::..|||||:.|||.||.|||.:.:.||.|:..|..||...||..:|||:
Zfish    59 MNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDGDKIPFIREAERLRLKHMADYPDYK 123

  Fly   492 YRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMRQLWCRTGGVSGGSGSLCADACP---------- 546
            ||||.|..........::|..|...:.|.|.....  :..|.:.......|.|.|          
Zfish   124 YRPRKKVKSSGSKPSEKLSISKPSSKKRSAGKPHK--KEPGPADHHSLYKAKAAPVVKQSPEKKK 186

  Fly   547 -----KGSGGSNSQVAVAAAAAVYHLQDMA-------SSAASTAHGHDCGHTPPQQFFYPPESLS 599
                 ..|..|.|..||.|:..:....|.:       .::.|.....|..:|...:...|..|.:
Zfish   187 RLYIFSSSSSSPSPAAVPASPTLSSSADSSDPLSLYEDASGSGKEDADTRYTGSMRAPSPTPSAA 251

  Fly   600 PSGFSSDEVELASQRELDD 618
            .|. ||.:...:|..|.||
Zfish   252 HSS-SSSQFSSSSDEEPDD 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 HMG-box_EGL13-like 421..498 CDD:438848 45/76 (59%)
sox4bNP_957195.2 None

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