DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox102F and sox8b

DIOPT Version :10

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_001020636.3 Gene:sox8b / 386704 ZFINID:ZDB-GENE-031114-1 Length:356 Species:Danio rerio


Alignment Length:329 Identity:89/329 - (27%)
Similarity:125/329 - (37%) Gaps:107/329 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 SKPKGSPSSS-PNSSSQRDHCENLTPVVSSPPLSWHQGQPHYAEIELPLLKSHGRVWNSAVACSG 355
            |.|.||.||. |      |.|::......:.|.:...||  .||.|                   
Zfish     9 SSPTGSCSSECP------DECDSDPSCSPAGPAALRMGQ--QAEDE------------------- 46

  Fly   356 GSRATRVSRDSVNSCGTNSERSAALDPESLNSGQLGPVPASPSSQPLRQGNGHGHGGNHGHVHSK 420
            ..|.....||:|:......:.|            |.|:|...|      |:|          .||
Zfish    47 DGRFPVCIRDAVSQVLKGYDWS------------LVPMPVRVS------GSG----------KSK 83

  Fly   421 PHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHME 485
            ||:|||||||||||:..|||:....|.:||:.:||.||..|:.::.::|:|:.||..||...|.:
Zfish    84 PHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLTESEKRPFVEEAERLRVQHKK 148

  Fly   486 QHPDYRYRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMRQLWCRTGGVSGGSGSLCADACPKGSG 550
            .||||:|:||                     |.:|.|       .|.....:||.......|...
Zfish   149 DHPDYKYQPR---------------------RRKRVE-------PGHAESEAGSELMQHMYKAEP 185

  Fly   551 GSNSQVAVAAAAAVYHLQDMASSAASTAHGHDCGHTPPQQFFYPPESLSPSG------FSSDEV- 608
            |..     ....:..|:.|      .|.|.|. ..|||.    .|::..|.|      ||:.:: 
Zfish   186 GMG-----RLTGSPDHITD------HTGHPHG-PPTPPT----TPKTEHPQGPKQNIDFSNVDIS 234

  Fly   609 ELAS 612
            ||::
Zfish   235 ELST 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 HMG-box_EGL13-like 421..498 CDD:438848 38/76 (50%)
sox8bNP_001020636.3 None

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