Protein Alignment Sox102F and sox4a

DIOPT Version :10

• Sequence 1: NP_001014695.1
• Gene: Sox102F / 43844
• FlyBaseID: FBgn0039938
• Length: 618
• Species: Drosophila melanogaster
• Sequence 2: NP_998287.1
• Gene: sox4a / 336346
• ZFINID: ZDB-GENE-030131-8290
• Length: 363
• Species: Danio rerio
• Alignment Length: 281
• Identity: 88/281 - (31%)
• Similarity: 123/281 - (43%)
• Gaps: 72/281 - (25%)

  Fly   372 TNSERSAALDPESLNSGQL------GPVPASPSSQPLRQGNGHGHGGNHGHV----HSKPHIKRP 426
            ::|..|..|..:|::||::      .|.|.||:|           .|:...:    ....|||||
Zfish    14 SSSSSSDVLPGDSIDSGEMDLDMDASPTPGSPNS-----------AGDKMDIAWCKTPSGHIKRP 67

  Fly   427 MNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYR 491
            |||||||::.|||||::..|||||:.|||.||.|||.:.::||.|:..|..||...||..:|||:
Zfish    68 MNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHMADYPDYK 132

  Fly   492 YRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMRQLWCRTGGVSGGSGSLCADACPKGSGGSNSQV 556
            ||||         ||::.|..|.   ..:||.         ||...|   |.:..|.|..:.|:.
Zfish   133 YRPR---------KKVKSSSGKT---GEKAER---------VSASPG---AKSASKKSSKTLSRT 173

  Fly   557 -------------------AVAAAAAVYHLQDMASSAASTAH---GHDCGHTPPQQFFYPPESLS 599
                               |:..:.:|...:.:....|...|   |.....:||........:||
Zfish   174 HRKSTTLELTSHSVPADHHALYKSRSVSAAKQIPEKPAKRGHVYGGCSTDSSPPSVAVPASPTLS 238

  Fly   600 PSGFSSD-----EVELASQRE 615
            .|..|||     |..|||.:|
Zfish   239 SSAESSDPLSLYEDGLASGKE 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox102F	NP_001014695.1	HMG-box_EGL13-like	421..498	CDD:438848	45/76 (59%)
sox4a	NP_998287.1	HMG-box_SoxC	63..138	CDD:438838	45/83 (54%)