DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox102F and sox11b

DIOPT Version :9

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_571412.1 Gene:sox11b / 30603 ZFINID:ZDB-GENE-980526-466 Length:368 Species:Danio rerio


Alignment Length:322 Identity:88/322 - (27%)
Similarity:118/322 - (36%) Gaps:109/322 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 VSRDSVNSCGTNSERSAALDPESLNSGQLGPVPASPSSQPLRQGNGHGHGGNHGHVHSKPHIKRP 426
            |||::     |::|.|..:        ...|||..|.......|                |||||
Zfish    14 VSRET-----TDTEESEMM--------ACSPVPPKPDWCKTATG----------------HIKRP 49

  Fly   427 MNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYR 491
            |||||||:|.|||||::..|||||:.|||.||.|||.:.:::|.|:..|..||...||..:|||:
Zfish    50 MNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLQHMADYPDYK 114

  Fly   492 YRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMRQLWCRTGGVSGGSGSLCADACPKGSGGSNSQV 556
            |||:.|.......|....|..|:               :..|...:|..||...|...|...::.
Zfish   115 YRPKKKPKLDSSSKPAVQSPEKI---------------SKSVKAAAGKKCAKLKPSKPGNITARA 164

  Fly   557 AVAAAAAVY---------------------------------------HLQ-------DMASSAA 575
            :.......|                                       |::       ...||||
Zfish   165 STQDCRFNYVFTNLKVTKSIKRELTDDEDDDDDDDDDDDEEDDYEDEEHIRLHNVPASPTLSSAA 229

  Fly   576 STAHG----HDCGH---TPPQQFFYP-----------PESLSP-SGFSSDEVELASQRELDD 618
            .:.||    .:..|   ||..:.||.           |.|:|| |.|.|.....:|..|..|
Zfish   230 ESEHGASMYEESRHTSATPGSRLFYNFKNITKQSAAYPASVSPASSFRSVSSSSSSSSEDSD 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 SOX-TCF_HMG-box 422..493 CDD:238684 41/70 (59%)
sox11bNP_571412.1 SOX-TCF_HMG-box 45..112 CDD:238684 38/66 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582359
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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