DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox102F and ste11

DIOPT Version :10

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_596656.1 Gene:ste11 / 2540258 PomBaseID:SPBC32C12.02 Length:468 Species:Schizosaccharomyces pombe


Alignment Length:222 Identity:57/222 - (25%)
Similarity:96/222 - (43%) Gaps:59/222 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   420 KPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSK-LH 483
            |..:|||:|:||::.:|.:.:|    |..::.:||:|:|..|:..| |..:.||.:.|.|.: .|
pombe    13 KSSVKRPLNSFMLYRRDRQAEI----PTSNHQSISRIIGQLWRNES-AQVKKYYSDLSALERQKH 72

  Fly   484 MEQHPDYRYRPRPKRTCIVDGKKMR-------ISEYKVLMRNRRA--------------EMRQLW 527
            |.::|:|:|.|:.:.|.....||:.       .|:|.||.:..::              |...| 
pombe    73 MLENPEYKYTPKKRSTVRRRHKKVSPSSGSFVASDYVVLQQIAQSSKTLKQTEPEKPVNEEETL- 136

  Fly   528 CRTGGVSGGSGSLCADAC--PKGSGGSN----SQVAVAAAAAVYH--------LQDMASSAASTA 578
                      .:|.|.|.  || ||.||    |:::..:::.:..        ..|..|:..||.
pombe   137 ----------AALLAPALSYPK-SGKSNLIETSELSCLSSSPMIRSHTIPSLSFTDQVSTTISTL 190

  Fly   579 HGHDCGHTPPQQ---FFYPPESLSPSG 602
               |.....|..   ::..|.|.||.|
pombe   191 ---DKSEQAPSSLGIYYRSPSSGSPIG 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 HMG-box_EGL13-like 421..498 CDD:438848 26/77 (34%)
ste11NP_596656.1 HMG-box_ROX1-like 16..83 CDD:438791 25/71 (35%)

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