Protein Alignment Sox102F and Tfam

DIOPT Version :10

• Sequence 1: NP_001014695.1
• Gene: Sox102F / 43844
• FlyBaseID: FBgn0039938
• Length: 618
• Species: Drosophila melanogaster
• Sequence 2: NP_033386.1
• Gene: Tfam / 21780
• MGIID: 107810
• Length: 243
• Species: Mus musculus
• Alignment Length: 186
• Identity: 34/186 - (18%)
• Similarity: 66/186 - (35%)
• Gaps: 64/186 - (34%)

  Fly   339 LLKSHGRVWNSAVACSGGSRATRVSRDSVNSCGTNSERSAALDPESLNSGQLGPVPASPSSQPLR 403
            :||:.||......|..||...:.:|...:..|.::                :|..|
Mouse    10 VLKALGRTGVEMCAGCGGRIPSSISLVCIPKCFSS----------------MGSYP--------- 49

  Fly   404 QGNGHGHGGNHGHVHSKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNAD 468
                                |:||::::.::.::..|.....||...|.:.:.:.|.|:.:..|:
Mouse    50 --------------------KKPMSSYLRFSTEQLPKFKAKHPDAKLSELVRKIAALWRELPEAE 94

  Fly   469 KQPY-----------------YEEQSRLSKLHMEQHPDYRYRPRPKRTCIVDGKKM 507
            |:.|                 |:||...|:| |....:.|.| |.|:..:|..:::
Mouse    95 KKVYEADFKAEWKAYKEAVSKYKEQLTPSQL-MGMEKEARQR-RLKKKALVKRREL 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox102F	NP_001014695.1	HMG-box_EGL13-like	421..498	CDD:438848	21/93 (23%)
Tfam	NP_033386.1	HMG_box	49..116	CDD:459837	13/95 (14%)
		HMG-box_SF	134..232	CDD:469606	4/16 (25%)