DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox102F and Sox30

DIOPT Version :9

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_775560.1 Gene:Sox30 / 214105 MGIID:1341157 Length:782 Species:Mus musculus


Alignment Length:490 Identity:108/490 - (22%)
Similarity:171/490 - (34%) Gaps:153/490 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 QPPMPNAQQLLQLIPGHENAQSVPTHHHSHPQSEAFSTHKMALAPMWSTAA----VAAAHIQAA- 168
            |||.|...:.|:..|..:..::......:..:|:  |....|.|.|.:.|:    .|||..||| 
Mouse    18 QPPRPTPPRPLRPAPPAQPVEAATFRAAAAERSQ--SPSAQATAAMAAVASSCGEAAAAGAQAAG 80

  Fly   169 -----------------------------LAAAAVAAANNNKNSSHFSNNTNIVGLATRGNELLN 204
                                         .||||.|||     ::..|....::.|.        
Mouse    81 TRRLLQVKPEQVLLLPPGGPGVPPAPDEGAAAAAAAAA-----AAASSAQARLLQLR-------- 132

  Fly   205 TDSDPQMEIGETRRGGNGGSCR-----SRPESPTYENPPYEI-----LSY-SHNTPPESPH---- 254
                |::.:...:...:||.||     .:|.:...:....|:     ||. |..|....|.    
Mouse   133 ----PELLLLPPQSAADGGPCRPELHPMQPRTLLVKAEKQELGAGLDLSVGSRRTTEAGPRASRA 193

  Fly   255 -----------GRTADCSK---NFSPSPTDNL------SIASVSEA--QDSEMDAPLNLSKPKGS 297
                       ||.:|..|   ....:|.|.|      |:.::.|.  :..|.|.|         
Mouse   194 AKLDGTGKALDGRRSDEKKAKLEAEEAPRDALKGGEGKSLLAIGEGVIKTEEPDRP--------- 249

  Fly   298 PSSSPNSSSQRDHC-------------ENLTPVVSSPPLSWHQGQPHYAEIELPLLKSHGRVWNS 349
                      ||.|             .:...:::.||.::   .||..::..| |..|.....:
Mouse   250 ----------RDDCRLGTEATSNGLVHSSKEAILAQPPSAF---GPHQQDLRFP-LTLHTVPPGA 300

  Fly   350 AVACSGGSRATRVSRDSVNSCGTNSERSAALDPESLNSGQLGPVPASPSSQPL------RQGNGH 408
            .:...|...:..:....|.......:..:.|:|......:..|:...||...:      :..|| 
Mouse   301 RIQFQGPPPSELIRLSKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNG- 364

  Fly   409 GHGGNHGHVHSKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYY 473
                         |:|||||||||||:..|..:.||.|..:|:.||..||..|..:|...|:|||
Mouse   365 -------------HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYY 416

  Fly   474 EEQSRLSKLHMEQHPDYRYRPRPKRTCIVDGKKMR 508
            :|..::.:.|.|:.|.:.|:|||       ||:.|
Mouse   417 DEAQKIKEKHREEFPGWVYQPRP-------GKRKR 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 SOX-TCF_HMG-box 422..493 CDD:238684 31/70 (44%)
Sox30NP_775560.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37 6/18 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..117 4/21 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..226 17/86 (20%)
SOX-TCF_HMG-box 365..435 CDD:238684 31/69 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 501..604
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 704..724
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 756..782
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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