Protein Alignment Sox102F and sox-3

DIOPT Version :10

• Sequence 1: NP_001014695.1
• Gene: Sox102F / 43844
• FlyBaseID: FBgn0039938
• Length: 618
• Species: Drosophila melanogaster
• Sequence 2: NP_510439.1
• Gene: sox-3 / 185534
• WormBaseID: WBGene00004950
• Length: 212
• Species: Caenorhabditis elegans
• Alignment Length: 143
• Identity: 58/143 - (40%)
• Similarity: 82/143 - (57%)
• Gaps: 20/143 - (13%)

  Fly   370 CGTNSERSAALDPESLNSGQLGPVPASPSSQPLRQGNGHGHGGNHGHVHSKPHIKRPMNAFMVWA 434
            |...::.|...|..|::||      .||...|:...|            |..|:||||||||||:
 Worm    13 CTEAAKTSYDEDTTSVSSG------LSPPGSPVDLQN------------SLDHVKRPMNAFMVWS 59

  Fly   435 KDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYRYRPR--PK 497
            :.:|||:.:..|.||||.|||.|||.||.:|..:|:|:.:|..||..|||::||||:||||  ||
 Worm    60 RGQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPK 124

  Fly   498 RTCIVDGKKMRIS 510
            .:.:....::.|:
 Worm   125 SSNLKQQPRLNIA 137

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox102F	NP_001014695.1	HMG-box_EGL13-like	421..498	CDD:438848	45/78 (58%)
sox-3	NP_510439.1	HMG-box_SoxB	46..125	CDD:438790	45/78 (58%)