Protein Alignment Sox102F and sox-4

DIOPT Version :10

• Sequence 1: NP_001014695.1
• Gene: Sox102F / 43844
• FlyBaseID: FBgn0039938
• Length: 618
• Species: Drosophila melanogaster
• Sequence 2: NP_001335567.1
• Gene: sox-4 / 182547
• WormBaseID: WBGene00015716
• Length: 260
• Species: Caenorhabditis elegans
• Alignment Length: 275
• Identity: 73/275 - (26%)
• Similarity: 104/275 - (37%)
• Gaps: 103/275 - (37%)

  Fly   239 YEILSYSHNTPPESPHGRTADCSKNFSPSPTDNL-----------SIASVSEAQDSEMDAPLNLS 292
            :.:.|.:..|.|      .|..|....|..:.|:           ::.|..:..||:     .||
 Worm    10 FNLYSQARKTTP------IAAASSVSCPIVSPNMDATQKLLAIMATVKSFEQVNDSD-----GLS 63

  Fly   293 KPKG--SPSSSPN--SSSQRDHCENLTPVVSSPPLSWHQGQPHYAEIELPLLKSHGRVWNSAVAC 353
            .|..  ||:.|||  ||.|   ...:..::.           ||.
 Worm    64 SPSSPESPTESPNVISSVQ---ASTIADIIG-----------HYV-------------------- 94

  Fly   354 SGGSRATRVSRDSVNSCGTNSERSAALDPESLNSGQLGPVPASPSSQPLRQGNGHGHGGNHGHVH 418
            :|.|     .:|.|||    |::||                    |||              ...
 Worm    95 NGNS-----IKDVVNS----SQKSA--------------------SQP--------------RTA 116

  Fly   419 SKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLH 483
            .:|.|||||||||||::..|::|.......|||:|||:|||.|:.|...:|.|:.|...:|.:.|
 Worm   117 REPRIKRPMNAFMVWSQQRRQQIAATGQKFHNSDISKMLGAEWRKMEEHEKVPFVERAKQLREEH 181

  Fly   484 MEQHPDYRYRPRPKR 498
            ...||||.||||.::
 Worm   182 FNAHPDYVYRPRRRK 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox102F	NP_001014695.1	HMG-box_EGL13-like	421..498	CDD:438848	38/76 (50%)
sox-4	NP_001335567.1	HMG-box_SOX	120..194	CDD:438820	36/73 (49%)