Sequence 1: | NP_001014695.1 | Gene: | Sox102F / 43844 | FlyBaseID: | FBgn0039938 | Length: | 618 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_536328.1 | Gene: | Sox9 / 140586 | RGDID: | 620474 | Length: | 507 | Species: | Rattus norvegicus |
Alignment Length: | 348 | Identity: | 79/348 - (22%) |
---|---|---|---|
Similarity: | 120/348 - (34%) | Gaps: | 136/348 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 257 TADCSKNFSPSPTDNLSIASV------SEAQDSEMDAPLNLSKPKGSPSSSPNSSSQRDHCENLT 315
Fly 316 PVVSSPPLSWHQGQPHYAEIELPLLKSHGRVWNSAVACSGGSRATRVSRDSVNSCGTNSERSAAL 380
Fly 381 DPESLNSGQLGPVPASPSSQPLRQGNGHGHGGNHGHVHSKPHIKRPMNAFMVWAKDERRKILKAC 445
Fly 446 PDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCIVDGKKMRIS 510
Fly 511 EYKVLMRNRRAEMRQLWCRTGGVSGGSGSLCADACPKGSGGSNSQVAVAAAAAVYHLQ-DMASSA 574
Fly 575 ASTAHGHDCGH---------TPP 588 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sox102F | NP_001014695.1 | SOX-TCF_HMG-box | 422..493 | CDD:238684 | 34/70 (49%) |
Sox9 | NP_536328.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..67 | 14/61 (23%) | |
Sox_N | 22..94 | CDD:403592 | 22/133 (17%) | ||
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P48436 | 63..103 | 13/117 (11%) | |||
PQA. /evidence=ECO:0000250|UniProtKB:P48436 | 63..103 | 13/117 (11%) | |||
SOX-TCF_HMG-box | 104..174 | CDD:238684 | 34/69 (49%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 160..271 | 24/121 (20%) | |||
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P48436 | 224..307 | 4/15 (27%) | |||
9aaTAD 1. /evidence=ECO:0000250|UniProtKB:P48436 | 275..284 | ||||
9aaTAD 2. /evidence=ECO:0000250|UniProtKB:P48436 | 290..298 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 335..429 | ||||
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P48436 | 392..507 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 477..507 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342354 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0527 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.830 |