DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox102F and sox8

DIOPT Version :9

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:XP_002932315.2 Gene:sox8 / 100497725 XenbaseID:XB-GENE-480865 Length:466 Species:Xenopus tropicalis


Alignment Length:391 Identity:106/391 - (27%)
Similarity:147/391 - (37%) Gaps:141/391 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 NTPPESPHGRTADCSKNFSPSPTDNLSIASVSEAQDSEMDAPLNLSKPKGSPSSSPNSSSQRDHC 311
            |...|..|.....|      |||...|  |:|...||:.|:||       ||:.|....|.|   
 Frog     3 NMSSEQEHVPEPPC------SPTGTAS--SMSHVSDSDSDSPL-------SPAGSEGRGSHR--- 49

  Fly   312 ENLTPVVSSPPLSWHQGQPHYAEIELPLLKSHGRVWNSAVACSGGSRATRVSRDSVNSCGTNSER 376
                     ||                                |.|:.::  ||...   |..||
 Frog    50 ---------PP--------------------------------GISQLSK--RDGEE---TMDER 68

  Fly   377 SAALDPESLN------SGQLGPVPASPSSQPLRQGNGHGHGGNHGHVHSKPHIKRPMNAFMVWAK 435
            ..|...|:::      ...|.|:|.            .|.||    :.:|||:|||||||||||:
 Frog    69 FPACIREAVSQVLKGYDWSLVPMPV------------RGSGG----LKAKPHVKRPMNAFMVWAQ 117

  Fly   436 DERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTC 500
            ..|||:....|.:||:.:||.||..|:.:|..:|:|:.||..||...|.:.||||:|:||     
 Frog   118 AARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKYQPR----- 177

  Fly   501 IVDGKKMRISEYKVLMRNRRAEMRQLWCRTG---GVSGGSGSLCADACPKGSGGSNSQVAVAAAA 562
                            |.:.|:..|....:|   |:.|||....:|: ..||.|.|         
 Frog   178 ----------------RRKSAKAGQSDSDSGAELGLHGGSQMYKSDS-GMGSMGEN--------- 216

  Fly   563 AVYHLQDMASSAASTAHG---------HDCGHTPPQQFFYPPESLSPSG-----FSSDEV-ELAS 612
               ||.   |..|...||         .|..|...|:..:....:..||     ||:.:: ||:|
 Frog   217 ---HLH---SEHAGQNHGPPTPPTTPKTDLHHGGKQELKHEGRRMMESGRQNIDFSNVDISELSS 275

  Fly   613 Q 613
            :
 Frog   276 E 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 SOX-TCF_HMG-box 422..493 CDD:238684 35/70 (50%)
sox8XP_002932315.2 Sox_N <39..94 CDD:372113 18/115 (16%)
SOX-TCF_HMG-box 104..174 CDD:238684 35/69 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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