DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox102F and sox10

DIOPT Version :10

Sequence 1:NP_001014695.1 Gene:Sox102F / 43844 FlyBaseID:FBgn0039938 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_001093691.1 Gene:sox10 / 100101700 XenbaseID:XB-GENE-480304 Length:436 Species:Xenopus tropicalis


Alignment Length:188 Identity:63/188 - (33%)
Similarity:85/188 - (45%) Gaps:51/188 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 HGHVHSKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSR 478
            :|...||||:|||||||||||:..|||:....|.:||:.:||.||..|:.::..||:|:.||..|
 Frog    81 NGGSKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNENDKRPFIEEAER 145

  Fly   479 LSKLHMEQHPDYRYRPRPKRTCIVDGKKMRISEYKVLMRNRRAEMRQLWCRTGGVSGGSGSLCAD 543
            |...|.:.||||:|:||                       ||        :.|..:.|       
 Frog   146 LRMQHKKDHPDYKYQPR-----------------------RR--------KNGKPNPG------- 172

  Fly   544 ACPKGSGGSNSQVAVAAAAAVY---HLQDMASSAASTAHG-HDCG--HTPPQQFFYPP 595
               :|.|.|.::...|:..|.|   ||.....|..|..:. |..|  |.||.    ||
 Frog   173 ---EGDGSSEAEGGAASIQAHYKNSHLDHRHGSPMSDGNSEHSAGQSHGPPT----PP 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox102FNP_001014695.1 HMG-box_EGL13-like 421..498 CDD:438848 39/76 (51%)
sox10NP_001093691.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55
Sox_N 12..79 CDD:463586
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P56693 48..88 2/6 (33%)
HMG-box_SoxE 89..163 CDD:438840 38/96 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..183 17/78 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 195..257 11/33 (33%)
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P56693 209..295 7/19 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..346
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P56693 327..436
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 413..436
Blue background indicates that the domain is not in the aligned region.

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