DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd102C and Foxl3

DIOPT Version :10

Sequence 1:NP_651951.1 Gene:fd102C / 43843 FlyBaseID:FBgn0039937 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_001419358.1 Gene:Foxl3 / 680273 RGDID:1594158 Length:231 Species:Rattus norvegicus


Alignment Length:209 Identity:69/209 - (33%)
Similarity:99/209 - (47%) Gaps:53/209 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 KPQHSYIGLIAMAILSSTDMKLVLSDIYQYILDNYPYFRSRGPGWRNSIRHNLSLNDCFIKSGRS 193
            |.:.|||.||||||..|...::.||.||.:|:..:||:|:....|:||||||||||.||:|..|:
  Rat    47 KTRESYIALIAMAIQQSPAGRVTLSGIYDFIMRKFPYYRANQRAWQNSIRHNLSLNSCFVKVPRT 111

  Fly   194 A---NGKGHYWAIH---PANMEDFRKGDFRRRKAQR--KVRKHMGLSVDDASTDSPSPPPLDLTT 250
            .   .|||:||...   .:.::.|..|:||||:.:|  |..:..| .:..|:..||.|   |.|.
  Rat   112 EGHDKGKGNYWTFAGGCESLLDLFENGNFRRRRRRRGPKSEEAPG-PLQPAARGSPGP---DGTQ 172

  Fly   251 PPPPSSQSALQLSALGYPYHQHYIGQFFNRSSAPGMTH----------YSPPDPALLMQ----RQ 301
            .|...:|:.|                         :||          .|.|||..:::    .|
  Rat   173 APDREAQARL-------------------------VTHRDIKFSIDYILSSPDPFPVLRSSCHSQ 212

  Fly   302 EANNLDQTIQPTQL 315
            ||..  .|::|.|:
  Rat   213 EARY--PTLEPQQM 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd102CNP_651951.1 FH_FOXQ2-like 129..223 CDD:410809 45/99 (45%)
Foxl3NP_001419358.1 FH_FOX 51..139 CDD:469596 39/87 (45%)

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