DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd102C and Foxm1

DIOPT Version :9

Sequence 1:NP_651951.1 Gene:fd102C / 43843 FlyBaseID:FBgn0039937 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_113821.2 Gene:Foxm1 / 58921 RGDID:61807 Length:771 Species:Rattus norvegicus


Alignment Length:704 Identity:136/704 - (19%)
Similarity:228/704 - (32%) Gaps:243/704 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QDQGTSSRDS-----------------NVPKPSLPNIYPLGTTRTSQAQSTTMTLEQYRLQLYNY 63
            |.|..:|.||                 .||.|..|...|.....:...::...||:       |.
  Rat   122 QSQAQTSTDSKRTELITETLGPKPGAKGVPVPKPPGALPRQRQESCGGEAAGCTLD-------NS 179

  Fly    64 ALNIERLRCPQYGGTGGSGASAPWLHLSPYGHHGSGSLPSVNRMAALSTISLFPQTQRIFQPE-- 126
            ..||:                  |  |......|.|.......:.......|.....::..|.  
  Rat   180 LTNIQ------------------W--LGKMSSDGLGRCSIKQELEEKENCHLEQNRVKVEAPSRA 224

  Fly   127 --------EPKPQHSYIGLIAMAILSSTDMKLVLSDIYQYILDNYPYFRS-RGPGWR-------- 174
                    ..:|.:||:.:|..||.|:...::.|.|||.:|.|::|||:. ..|||:        
  Rat   225 SVSWQDSVSERPPYSYMAMIQFAINSTERKRMTLKDIYTWIEDHFPYFKHIAKPGWKCWHQAYHK 289

  Fly   175 ----NSIRHNLSLNDCFIKSGRSANGKGHYWAIHPANMEDFRKGDFRRRKAQRKVRKHMGLS--- 232
                |||||||||:|.|::. .|||||..:|.|||:                  ..:::.|.   
  Rat   290 LGPQNSIRHNLSLHDMFVRE-TSANGKVSFWTIHPS------------------ANRYLTLDQVF 335

  Fly   233 --VDDASTDSPSPPPLDLTTPPPP-----SSQSALQLSALGYPYHQHYIGQFFNRSSAPGMTHYS 290
              ::..|..||.........|.|.     :.::.|.|.|              .|...|.:...|
  Rat   336 KPLEPGSPQSPEHLESQQKRPNPELRRNVTIKTELPLGA--------------RRKMKPLLPRVS 386

  Fly   291 PPDPALLMQRQEANNLDQTIQPTQLQQPHSHHQHFAYINSTTTTTIANMFSQTRKRQFDVASLLA 355
                :.|:..|...|....:||: ::.|      .....|..::.:|....:.|         :|
  Rat   387 ----SYLVPIQFPVNQSLVLQPS-VKVP------LPLAASLMSSELARHSKRVR---------IA 431

  Fly   356 PDVQIVDIVSEDQESSVTPTTSARTTTQTHH-------TVITKQTIHREVVL------GLEKP-- 405
            |.|.:       ....:.|..:.....:...       .::..|:|..||:.      .||:|  
  Rat   432 PKVLL-------SNEGIAPLPATEPMKEEKPLLGEGLLPLLPIQSIKEEVIQPGEDIPHLERPIK 489

  Fly   406 VQDADID------ADIDVEVNVDVVDDSIIP---DTDSYTD----------------GEDRKKTR 445
            |:...::      |.:..|::....|.|..|   ...||..                .|.|:.:|
  Rat   490 VESPPLEEWPSPCASVKEELSNSWEDSSCSPTPKPKKSYCGLKSPTRCVSEMLVTKRREKREVSR 554

  Fly   446 GTLKQ-----------IFSIEDNNSYLIDGRLSSFDADP---------DHDPDHDPEDLEQHNFS 490
            ...||           :|..||::::.....:.:..::|         :..|...|   .:....
  Rat   555 SRRKQHLQPPCLDEPELFFSEDSSTFRPAMEILAESSEPAPQLSCPQEEGGPFKTP---IKETLP 616

  Fly   491 IASSAARSLGSSSSQHEES---------SSLEECPIQECIVAPQTAL------ISSMATAKTSTL 540
            ::|:.::|:   .|:..||         ..|:..|::    .||.|.      :..|....|...
  Rat   617 VSSTPSKSV---LSRDPESWRLTPPAKVGGLDFSPVR----TPQGAFGPLPDSLGLMELNTTPLK 674

  Fly   541 SVPISDAYLELNQVDQHMLSRYYGSYIAAAARRASIDASNTSRTSSITPPPKIE 594
            |||:.|:..||                   ....:.|.::...:||  |||.:|
  Rat   675 SVPLFDSPREL-------------------LNSEAFDLASDPFSSS--PPPHLE 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd102CNP_651951.1 Forkhead 129..213 CDD:278670 39/96 (41%)
Foxm1NP_113821.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 94..165 10/42 (24%)
FH 235..322 CDD:238016 36/87 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..361 5/20 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 542..568 5/25 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 584..655 12/80 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 693..718 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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