DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fd102C and foxe3

DIOPT Version :9

Sequence 1:NP_651951.1 Gene:fd102C / 43843 FlyBaseID:FBgn0039937 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_001073150.2 Gene:foxe3 / 570855 ZFINID:ZDB-GENE-061214-6 Length:422 Species:Danio rerio


Alignment Length:385 Identity:101/385 - (26%)
Similarity:147/385 - (38%) Gaps:122/385 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 GSLPSVNRMAALS---TISLFPQT--QRIFQP-EEPKPQHSYIGLIAMAILSSTDMKLVLSDIYQ 157
            ||.|:.:|...:|   |....|.|  :|..:| :..||.:|||.||||||.:|.:.||.|..||:
Zfish    67 GSSPNTDREEVVSLGQTEEHLPATGSRRRKRPVQRGKPPYSYIALIAMAIANSPERKLTLGGIYK 131

  Fly   158 YILDNYPYFRSRGPGWRNSIRHNLSLNDCFIKSGRSAN--GKGHYWAIHPANMEDFRKGDF-RRR 219
            :|::.:|::|.....|:|||||||:|||||:|..|...  |||:||.:.||..:.|..|.| |||
Zfish   132 FIMERFPFYRENSKKWQNSIRHNLTLNDCFVKIPREPGRPGKGNYWTLDPAAEDMFDNGSFLRRR 196

  Fly   220 KAQRKVRKHMGLSVDDASTDSPSPPPLDLTTPPPPSSQSALQLSALGYPYHQHYIGQFFNRSSAP 284
            |..::.         |.||...........||.|...|:        ||           .:..|
Zfish   197 KRFKRT---------DVSTYPGYMQSSSAFTPTPMGRQA--------YP-----------NTLYP 233

  Fly   285 GMTH------YSPPDPALLMQRQEANNLDQTIQPTQLQQPHSHHQHFAYINSTTTTTIANMFSQT 343
            |:|.      ...|.||:|...|.:..:.|                    ......:|.|:.||.
Zfish   234 GVTSGYGSQLAGSPHPAMLHHYQASAGVTQ--------------------GQARMFSIDNIISQQ 278

  Fly   344 RKRQ----FDVASL------LAPDVQIVDIVSED----QESSVTPT---------------TSAR 379
            ...|    .:..||      |........:.:.|    |..::.||               ||:.
Zfish   279 TVMQSGGDLNTQSLGLGAGDLGTMTSSCSVSTSDPTCFQTQAINPTSNMLSRNTGSLASNMTSSY 343

  Fly   380 T----TTQTHHTVITKQTI--------------------------HREVVLGLEKPVQDA 409
            |    |:.:|.:.:|:...                          |.|.:|||..|..::
Zfish   344 TYPSPTSPSHLSGVTQSGFSPGGSQVYCSGNRISLPPVRSGSCADHTEPLLGLSGPTMNS 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd102CNP_651951.1 Forkhead 129..213 CDD:278670 43/85 (51%)
foxe3NP_001073150.2 FH 103..191 CDD:214627 43/87 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.