DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd102C and foxc1

DIOPT Version :9

Sequence 1:NP_651951.1 Gene:fd102C / 43843 FlyBaseID:FBgn0039937 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_001007864.1 Gene:foxc1 / 493250 XenbaseID:XB-GENE-479055 Length:495 Species:Xenopus tropicalis


Alignment Length:411 Identity:101/411 - (24%)
Similarity:166/411 - (40%) Gaps:136/411 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 GTGGSGASAPWLHLSPYGHHGSGSLPSVNRMAALSTISLFPQTQRIFQPEEPKPQHSYIGLIAMA 141
            |.|.:|.:||   :|.|.|      |:..:..|....:..|.|.:....:..||.:|||.||.||
 Frog    36 GGGYTGMAAP---MSMYSH------PAHEQYQAGMARAYGPYTPQPQPKDMVKPPYSYIALITMA 91

  Fly   142 ILSSTDMKLVLSDIYQYILDNYPYFRSRGPGWRNSIRHNLSLNDCFIKSGRSAN--GKGHYWAIH 204
            |.::.:.|:.|:.|||:|::.:|::|....||:||||||||||:||:|..|...  |||.||.:.
 Frog    92 IQNAPEKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLD 156

  Fly   205 PANMEDFRKGDF--RRRKAQRK--------------VRKHMG----------------------- 230
            |.:...|..|.|  |||:.::|              :::|.|                       
 Frog   157 PDSYNMFENGSFLRRRRRFKKKDVVKDATKEDKDRLLKEHHGSQPAAAQQQRQQQQGQAQAEQDS 221

  Fly   231 ----LSVDDASTD--SPSPP----PLDLTTPPPPSSQSALQLSALGYPYHQHYIGQFFNRSSAPG 285
                :.:.|..|:  :.|||    |...|.|...|..|:..:|:                    |
 Frog   222 GSQPVRIQDIKTENGTSSPPQAMSPALSTVPKIESPDSSSSMSS--------------------G 266

  Fly   286 MTHYSPPDPALLMQRQEANNLDQTIQPTQLQQPHSHHQHFAYIN--------------------S 330
            ..|..|.:.::.::..|:::      |   .|.|.|.|.|:..|                    |
 Frog   267 SPHSIPSNRSMSLEAAESHH------P---HQQHHHSQGFSVDNIMTSLRGSPQGSGELPSPLIS 322

  Fly   331 TTTTTIA--NMFSQTRKRQFDVASLLAP-----------------DVQIVDIVSEDQESSVTP-T 375
            ::.|.||  ::.:.:..:    .|:.:|                 ::|.:.:.|.|:...:|| .
 Frog   323 SSRTGIAPSSLLTYSPGQ----GSIYSPPCSQGTSSGGGAGTYHCNMQAMSLYSGDRSGHLTPAN 383

  Fly   376 TSARTT---TQTHHTVITKQT 393
            |.|.||   |...:::.|..|
 Frog   384 TPAATTVEDTLPDYSITTTTT 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd102CNP_651951.1 Forkhead 129..213 CDD:278670 41/85 (48%)
foxc1NP_001007864.1 Forkhead 79..164 CDD:365978 40/84 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..322 25/175 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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