DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd102C and foxc2

DIOPT Version :10

Sequence 1:NP_651951.1 Gene:fd102C / 43843 FlyBaseID:FBgn0039937 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_998857.1 Gene:foxc2 / 407875 XenbaseID:XB-GENE-481382 Length:463 Species:Xenopus tropicalis


Alignment Length:548 Identity:129/548 - (23%)
Similarity:187/548 - (34%) Gaps:177/548 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SSRDSN----VPKPSLPNIYPLGTTRTSQAQSTTMTL----EQYRLQLYNYALNIERLRCPQYGG 77
            |..|.|    ||..|..|.|....|..|.|  |.|::    |||                     
 Frog     6 SVADPNALGVVPYLSEQNYYRAAGTYGSMA--TPMSVYPAHEQY--------------------- 47

  Fly    78 TGGSGASAPWLHLSPYGHHGSGSLPSVNRMAALSTISLFPQTQRIFQPEEP----KPQHSYIGLI 138
            |.|...|     ..||.||                           ||..|    ||.:|||.||
 Frog    48 TPGMARS-----YGPYHHH---------------------------QPAAPKDLVKPPYSYIALI 80

  Fly   139 AMAILSSTDMKLVLSDIYQYILDNYPYFRSRGPGWRNSIRHNLSLNDCFIKSGRSAN--GKGHYW 201
            .|||.::.|.|:.|:.|||:|:|.:|::|....||:||||||||||:||:|..|...  |||.||
 Frog    81 TMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYW 145

  Fly   202 AIHPANMEDFRKGDFRRRKAQRKVRKHMGLSVDD--------------------------ASTDS 240
            .:.|.:...|..|.|.||:.:.| :|.:....:|                          ..::|
 Frog   146 TLDPDSYNMFENGSFLRRRRRFK-KKDVSREKEDRILKDQGKVQGPIPSLELPKHDKKIVIKSES 209

  Fly   241 PSPPPLDLTTPPPPSSQSALQLSALGYPYHQHYIGQFFNRSSAPGM-THYSPPDPALLMQRQEAN 304
            |..|.:.......|...||:|.|....             :|.|.: |..|.||     |...:|
 Frog   210 PELPVITKVENLSPDGGSAMQDSPRSV-------------ASTPSVSTENSIPD-----QHPASN 256

  Fly   305 NLDQTIQPTQLQQPHSHHQHFAYINSTT----------TTTIANMFSQTRKRQFDVASLLAPDVQ 359
            ........|....||........:...|          |.|.::::||...:..|.:......::
 Frog   257 GFSVENIMTLRTSPHGDLSPVPAVPCRTGMVPSLPINYTQTQSSVYSQACTQSMDTSGSYQCSMR 321

  Fly   360 IVDIVSEDQESSVTPTTSARTTTQTHHTVITKQTIHREVVLGLEKPVQDADIDADIDVEVNVDVV 424
            .:.:.:.|:.|.:...::....|..||.             |...|:....:.:.          
 Frog   322 AMSLYTGDRPSHMCAPSTLEEATSDHHN-------------GTASPLNSMSLGSG---------- 363

  Fly   425 DDSIIPDTDSYTDGEDRKKTRGTLKQIFSIEDNNSYLIDGRLSSFDADPDHDPDHDPEDLEQHNF 489
            .:|::  |.|:   ..:..|.|.....:       ||..|      ||..|        |..|||
 Frog   364 QESVL--TSSH---HQQTATGGQTAAPW-------YLNPG------ADISH--------LSGHNF 402

  Fly   490 SIASSAARSLGSSSSQHE---ESSSLEE 514
            ........::....:.|.   |||:|.|
 Frog   403 GSQQQTFPNVREMFNSHRLGIESSALSE 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd102CNP_651951.1 FH_FOXQ2-like 129..223 CDD:410809 47/95 (49%)
foxc2NP_998857.1 FH_FOXC1 66..158 CDD:410818 44/91 (48%)

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