DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fd102C and foxm1

DIOPT Version :9

Sequence 1:NP_651951.1 Gene:fd102C / 43843 FlyBaseID:FBgn0039937 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_957391.1 Gene:foxm1 / 394072 ZFINID:ZDB-GENE-040426-1275 Length:623 Species:Danio rerio


Alignment Length:542 Identity:127/542 - (23%)
Similarity:196/542 - (36%) Gaps:148/542 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 WLHLSPYGHHGSGSLPSVNRMAALSTISLFPQTQRIFQPEEPKPQHSYIGLIAMAILSSTDMKLV 151
            ||........||...|:.:........|..|:.:.  .|...:|.:||:.:|..||.|..:..:.
Zfish   142 WLGKMSSDGLGSEKCPNKDNPNDSQQQSKGPEKEN--DPHSERPPYSYMAMIQFAINSKNNRHMT 204

  Fly   152 LSDIYQYILDNYPYFRS-RGPGWRNSIRHNLSLNDCFIKSGRSANGKGHYWAIHPANMEDFRKGD 215
            |.:||.:|.|::||||. ..|||:|||||||||:|.||:. .|.:||..||.|.|          
Zfish   205 LKEIYNWIEDHFPYFRDIAKPGWKNSIRHNLSLHDMFIRE-TSPDGKISYWTIRP---------- 258

  Fly   216 FRRRKAQRKVRKHMGLSVDDASTDSPSPPPLDLTTPPPPSSQSALQLSALGYPYHQHYIGQFFNR 280
                :|.|      .|::|...  .|...||..|.|..|  |.|:         ||.      .:
Zfish   259 ----EANR------CLTLDQVY--KPLGDPLTPTCPQIP--QVAI---------HQQ------QK 294

  Fly   281 SSAPGMTHYSPPDPAL---------LMQRQEAN------NLDQ-----TIQPTQLQQPHSHHQHF 325
            ..||.:   ....|||         |:.|.::.      .|.|     |..|..|..|....   
Zfish   295 RGAPEL---KKAIPALGGTERKMKPLLPRTDSYLVPIQLPLGQSLFLPTSSPVSLSTPPQTQ--- 353

  Fly   326 AYINSTTTTTIANMFSQTRKRQFDVASLL--APDVQIV--DIVSEDQESSVTPTTSARTTTQTHH 386
               ||:|.::...:....:..|.|::|:|  .|..|.:  :.|.:...||..|...:|.|..:  
Zfish   354 ---NSSTPSSSKRVRIAPKVSQSDLSSVLLCKPASQEIKEEPVFQPVTSSEAPPPKSRRTDNS-- 413

  Fly   387 TVITKQTIHREVVLGLEKPVQDADIDADIDVEVNVDVVDDSIIPDTDSYTDGEDRKKTRGTLKQI 451
               :.:...|.|:...|:||                    .:.||:..:..        |.:..|
Zfish   414 ---SSRRKQRLVLPATEEPV--------------------LLYPDSTLFDS--------GVISDI 447

  Fly   452 FSIEDNNSYLIDGRLSSFDADPDHDPDHDPE-DLEQHNFSIASSAARSLGSSSSQHE-------- 507
            .:.:|..           :|||      .|| |.....:|..:....|..|||:..:        
Zfish   448 STFQDTR-----------EADP------KPELDSPNREYSFKTPIKSSHPSSSTPSKLPTVTLEP 495

  Fly   508 -------ESSSLEECPIQECI---VAPQTALISSMATAKTSTLSVPISDAYLELNQVDQHMLSRY 562
                   :...|:..||:...   |.||....:|::...|....:|:.::..||....:....| 
Zfish   496 WRITPVGKGGVLDFSPIRTPTGPHVTPQRNQHTSLSFTSTPFKELPLFNSPRELLTCSRSSPKR- 559

  Fly   563 YGSYIAAAARRASIDASNTSRT 584
              |..|.:.....:.|:|.|.|
Zfish   560 --SAPACSRELLQVGAANRSLT 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd102CNP_651951.1 Forkhead 129..213 CDD:278670 38/84 (45%)
foxm1NP_957391.1 FH 182..256 CDD:238016 36/74 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.