DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd102C and foxb1a

DIOPT Version :10

Sequence 1:NP_651951.1 Gene:fd102C / 43843 FlyBaseID:FBgn0039937 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_571360.1 Gene:foxb1a / 30542 ZFINID:ZDB-GENE-990616-47 Length:297 Species:Danio rerio


Alignment Length:274 Identity:81/274 - (29%)
Similarity:116/274 - (42%) Gaps:52/274 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 EPKPQHSYIGLIAMAILSSTDMKLVLSDIYQYILDNYPYFRSRGPGWRNSIRHNLSLNDCFIKSG 191
            :.||.:|||.|.||||.|..:..|.||:||::|:|.:||:|.....|:||:|||||.||||||..
Zfish    11 DQKPPYSYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIP 75

  Fly   192 RSAN--GKGHYWAIHPANMEDFRKGDFRRRKAQRKV------------------RKHMGLSVDDA 236
            |..:  |||.:||:||:..:.|..|.|.||:.:.||                  ::|..|.:...
Zfish    76 RRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVMTSEHLAPSKPSDAAHYLQQHAKLRLSAL 140

  Fly   237 STDSPSPPPLDLTTPPPPSSQSALQLS---------------ALGYPYHQ-------HYIGQFFN 279
            .|..|.....:|....|.:.:....:.               :.|||.|.       |.......
Zfish   141 GTHLPQMSSYNLGVSQPSTFKHPFAIENIIAREYKVPGGLAFSTGYPLHNQLTTAWPHMYSTSMM 205

  Fly   280 RSSAP-GMTH-----YSPPDPALLMQRQEANNLDQTIQPTQLQQPHSHHQHFAYINSTTTTTIAN 338
            .|:|| .||.     |..|..:|....|....:...|:||....||    |.....|.:..:::.
Zfish   206 DSAAPISMTSSDYSAYGVPIKSLCHGGQTLPAIPVPIKPTPAALPH----HIPAFLSNSPQSLSP 266

  Fly   339 MFSQTRKRQFDVAS 352
            ...||...|...|:
Zfish   267 TSPQTATSQSSPAT 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd102CNP_651951.1 FH_FOXQ2-like 129..223 CDD:410809 48/95 (51%)
foxb1aNP_571360.1 FH_FOXB2 1..110 CDD:410817 48/98 (49%)

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