DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd102C and foxa

DIOPT Version :9

Sequence 1:NP_651951.1 Gene:fd102C / 43843 FlyBaseID:FBgn0039937 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_571357.2 Gene:foxa / 30539 ZFINID:ZDB-GENE-990415-76 Length:355 Species:Danio rerio


Alignment Length:303 Identity:89/303 - (29%)
Similarity:119/303 - (39%) Gaps:79/303 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 YGG----TGGSGASAPWLHLSPY------------GHHGS--GSLPSVNRMAALSTISL----FP 117
            ||.    .|..|.|.|..|...|            |..||  |.||..|...|.:.|:.    |.
Zfish    23 YGSDSLPLGPRGYSPPEHHYQSYGVQCDSAPAVNPGRLGSPAGLLPPANPPKAYAEINSSEPEFQ 87

  Fly   118 QTQRIFQP--EEPKPQHSYIGLIAMAILSSTDMKLVLSDIYQYILDNYPYFRSRGPGWRNSIRHN 180
            :.:.:::.  ...||.:|||.||.|||..|...:|.|::||.:|...:||:|.....|:|||||:
Zfish    88 ELKSVYRRTLSHAKPPYSYISLICMAIQQSPAKRLTLNEIYDWIRQLFPYYRQNQQRWQNSIRHS 152

  Fly   181 LSLNDCFIKSGRSAN--GKGHYWAIHPANMEDFRKGDFRRRKAQRKVRKHMGLSVDDASTD---- 239
            ||.||||::..||.:  |||.|||:||.:...|..|.:.||:.:.|.:|......:....|    
Zfish   153 LSFNDCFVRVPRSPDSPGKGSYWALHPDSGNMFENGCYMRRQKRFKCQKSTSTGKNSEGEDVKVE 217

  Fly   240 -----------SPSPPPLDLT---------TPPPPSSQSALQLSALGYPYHQHYIGQFFNRSSAP 284
                       |...|..|.|         ....|:|.|.|..|...:|.....|.         
Zfish   218 KKKKKEIKSVSSCKSPTSDATKQSSTTVSYANTKPASPSHLNPSHTLFPTQPPEIS--------- 273

  Fly   285 GMTH---YSPPDPALLMQRQEANNLDQTIQPTQLQ-QPHSHHQ 323
              ||   .|.|.||.:              .|.|. :|.|.||
Zfish   274 --THLPSLSVPFPASM--------------ETSLHCEPSSQHQ 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd102CNP_651951.1 Forkhead 129..213 CDD:278670 42/85 (49%)
foxaNP_571357.2 FH 101..189 CDD:214627 42/87 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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