Protein Alignment fd102C and Foxn4

DIOPT Version :10

• Sequence 1: NP_651951.1
• Gene: fd102C / 43843
• FlyBaseID: FBgn0039937
• Length: 599
• Species: Drosophila melanogaster
• Sequence 2: NP_001376188.1
• Gene: Foxn4 / 288736
• RGDID: 1306389
• Length: 572
• Species: Rattus norvegicus
• Alignment Length: 473
• Identity: 116/473 - (24%)
• Similarity: 169/473 - (35%)
• Gaps: 165/473 - (34%)

  Fly    14 ADQDQGTS------SRDSNVPKPSLPNIYPLGTTRTSQAQSTTMTLE-------QYRLQLYNYAL 65
            ||...|.:      |:.:.||:..| .:.|:|:.|.|..|.....:.       |...|||:.|.
  Rat   135 ADPHVGAAPRPMLRSQTAMVPRGML-GLSPIGSYRASAEQMNQFPVGGQSSSGLQEMPQLYSPAT 198

  Fly    66 NIE------RLRCPQYGGTGGSGASAPWLHLSPYGHHGSGSLPSVNRMAALSTISLFPQTQ-RIF 123
            .|:      ..:||.....|...|:.|     ||                       ||.. .:.
  Rat   199 QIQFPLPSGSQQCPPTSLYGSPFAARP-----PY-----------------------PQAHVTVH 235

  Fly   124 QPEE------PKPQHSYIGLIAMAILSSTDMKLVLSDIYQYILDNYPYFRSRGPGWRNSIRHNLS 182
            .|:|      |||.:||..|||||:.||....|.:|:||.::.:::|||::...||:||:|||||
  Rat   236 SPQEAHPKHYPKPIYSYSCLIAMALKSSKTGSLPVSEIYSFMKEHFPYFKTAPDGWKNSVRHNLS 300

  Fly   183 LNDCFIKSGRSANG---KGHYWAIHPANM----EDFRKGDFRRRKAQRKVRKHMG--LSVDDAST 238
            ||.||.|.....:|   ||..||::.|.:    |:..|.   :||....:.:.|.  ..:|...:
  Rat   301 LNKCFEKVETKPSGSSRKGCLWALNLARIDKVEEEMHKW---KRKDLAAIHRSMANPEELDKLIS 362

  Fly   239 D------------SPSPPPLDLTT--------------PPPPSSQSALQLSALGYPYHQHYI--- 274
            |            .|..|.|...|              ||.|    .:.||....|.| |.:
  Rat   363 DRPESCRRPGKQGEPEVPVLTRATTVAMTHSCLAISQLPPKP----LMTLSLQSVPLH-HQVQPQ 422

  Fly   275 GQFFNRSSAPGMTHYSPPDPALLMQRQEANNLDQTIQPTQLQQPHSHHQHFAYINSTTTTTI--- 336
            ......|.||..|   ||..||           ..:.|..|.||........::|.:|.|..
  Rat   423 AHLAPDSPAPAQT---PPLHAL-----------PNLSPGPLPQPAVGRVPGDFLNISTDTNTEVD 473

  Fly   337 ------------ANMFSQTRKRQFDVASLLA--------------------------PDVQIVDI 363
                        .|::.:.|:..|.:.:|.|                          ||||:..:
  Rat   474 ALDPSIMDFALQGNLWEEMREESFSLDTLGAFGDSPLGCDLGTPSLTPVSGSGDQPFPDVQVTGL 538

  Fly   364 ------VSEDQESSVTPT 375
                  |:.|   ||.|:
  Rat   539 YAAYSTVTAD---SVAPS 553

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fd102C	NP_651951.1	FH_FOXQ2-like	129..223	CDD:410809	42/100 (42%)
Foxn4	NP_001376188.1	COG5025	<143..>357	CDD:227358	70/245 (29%)
		FH_FOX	242..347	CDD:469596	43/107 (40%)