Protein Alignment fd102C and Foxa3

DIOPT Version :10

• Sequence 1: NP_651951.1
• Gene: fd102C / 43843
• FlyBaseID: FBgn0039937
• Length: 599
• Species: Drosophila melanogaster
• Sequence 2: NP_001420666.1
• Gene: Foxa3 / 25100
• RGDID: 2809
• Length: 361
• Species: Rattus norvegicus
• Alignment Length: 280
• Identity: 90/280 - (32%)
• Similarity: 116/280 - (41%)
• Gaps: 82/280 - (29%)

  Fly    77 GTGGS----GASAPWLHLSPYGHHGSGSLPSVNRMAALSTISLFPQTQRIFQPEEPKPQHSYIGL 137
            |||||    ||..|.|      .||........|..|                 ..||.:|||.|
  Rat    93 GTGGSASGYGAPGPGL------VHGKEMAKGYRRPLA-----------------HAKPPYSYISL 134

  Fly   138 IAMAILSSTDMKLVLSDIYQYILDNYPYFRSRGPGWRNSIRHNLSLNDCFIKSGRSAN--GKGHY 200
            |.|||..:....|.||:|||:|:|.:||:|.....|:|||||:||.||||:|..||.:  |||.|
  Rat   135 ITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSY 199

  Fly   201 WAIHPANMEDFRKGDFRRR----KAQRKVRKHMGLSVDDASTD------------------SPSP 243
            ||:||::...|..|.:.||    |.:.|.:|  |.|...|:.:                  ||:.
  Rat   200 WALHPSSGNMFENGCYLRRQKRFKLEEKAKK--GNSATSATRNGTVGSATSATTTAATAVTSPAQ 262

  Fly   244 PPLDLTTPPPPSSQSALQLSAL-------GYPYHQHYIGQFFNRSSAPGMTHYSPP----DPALL 297
            |  ..|.|..|.:||...:..|       ..||        |.....||......|    .|..:
  Rat   263 P--QPTPPSEPEAQSGEDVGGLDCASPPSSAPY--------FTGLELPGELKLDAPYNFNHPFSI 317

  Fly   298 MQRQEANNL--DQTIQPTQL 315
                  |||  :||..|::|
  Rat   318 ------NNLMSEQTSTPSKL 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fd102C	NP_651951.1	FH_FOXQ2-like	129..223	CDD:410809	49/99 (49%)
Foxa3	NP_001420666.1	FH_FOXA3	124..225	CDD:410814	49/100 (49%)