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Protein Alignment fd102C and Foxa3

DIOPT Version :10

Sequence 1:	NP_651951.1	Gene:	fd102C / 43843	FlyBaseID:	FBgn0039937	Length:	599	Species:	Drosophila melanogaster
Sequence 2:	NP_032286.1	Gene:	Foxa3 / 15377	MGIID:	1347477	Length:	353	Species:	Mus musculus

Alignment Length:	278	Identity:	89/278 - (32%)
Similarity:	120/278 - (43%)	Gaps:	75/278 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly    77 GTGGS--GASAPWLHLSPYGHHGSGSLPSVNRMAALSTISLFPQTQRIFQPEEPKPQHSYIGLIA 139
            |||||  |:::.::...|...||........|..|                 ..||.:|||.||.
Mouse    82 GTGGSTGGSASGYVAPGPGLVHGKEMAKGYRRPLA-----------------HAKPPYSYISLIT 129

  Fly   140 MAILSSTDMKLVLSDIYQYILDNYPYFRSRGPGWRNSIRHNLSLNDCFIKSGRSAN--GKGHYWA 202
            |||..:....|.||:|||:|:|.:||:|.....|:|||||:||.||||:|..||.:  |||.|||
Mouse   130 MAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWA 194

  Fly   203 IHPANMEDFRKGDFRRR----KAQRKVRKHMGLSVDDASTD------------------SPSPPP 245
            :||::...|..|.:.||    |.:.|.:|  |.|...||.:                  ||:.|.
Mouse   195 LHPSSGNMFENGCYLRRQKRFKLEEKAKK--GNSATSASRNGTAGSATSATTTAATAVTSPAQPQ 257

  Fly   246 LDLTTPPPPSSQSALQLSAL-------GYPYHQHYIGQFFNRSSAPGMTHYSPP----DPALLMQ 299
               .||..|.:||...:..|       ..||        |:....||......|    .|..:
Mouse   258 ---PTPSEPEAQSGDDVGGLDCASPPSSTPY--------FSGLELPGELKLDAPYNFNHPFSI-- 309

  Fly   300 RQEANNL--DQTIQPTQL 315
                |||  :||..|::|
Mouse   310 ----NNLMSEQTSTPSKL 323

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.