DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd102C and Foxn4

DIOPT Version :10

Sequence 1:NP_651951.1 Gene:fd102C / 43843 FlyBaseID:FBgn0039937 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_683737.2 Gene:Foxn4 / 116810 MGIID:2151057 Length:521 Species:Mus musculus


Alignment Length:477 Identity:113/477 - (23%)
Similarity:175/477 - (36%) Gaps:157/477 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 TADQDQGTS-------SRDSNVPKPSLPNIYPLGTTRTS-----------QAQSTTMTLEQYRLQ 59
            |||...|.:       |:.:.||:..| .:.|:|..|.|           ||.|....:.    |
Mouse    83 TADLHVGAAPRPLLRRSQTAVVPRGVL-GLSPIGNHRASAEQMNQFPAGGQASSGLQEMP----Q 142

  Fly    60 LYN------YALNIERLRCPQYGGTGGSGASAPWLHLSPYGHHGSGSLPSVNRMAALSTISLFPQ 118
            ||:      :.|.:...:||..|           |:.||:     .:.||            :||
Mouse   143 LYSPATQIPFPLPLGSQQCPPAG-----------LYGSPF-----SARPS------------YPQ 179

  Fly   119 TQ-RIFQPEEPKPQH------SYIGLIAMAILSSTDMKLVLSDIYQYILDNYPYFRSRGPGWRNS 176
            .. .:...:||.|:|      ||..|||||:.:|....|.:|:||.::.:::|||::...||:||
Mouse   180 AHGAMHASQEPHPKHYPKPIYSYSCLIAMALKNSKTGSLPVSEIYSFMKEHFPYFKTAPDGWKNS 244

  Fly   177 IRHNLSLNDCFIKSGRSANG---KGHYWAIHPANMEDFRKGDFR-RRKAQRKVRKHMG--LSVDD 235
            :|||||||.||.|....::|   ||..||::.|.::...:...: :||....:.:.|.  ..:|.
Mouse   245 VRHNLSLNKCFEKVETKSSGSSRKGCLWALNLARIDKMEEEMHKWKRKDLAAIHRSMANPEELDK 309

  Fly   236 ASTDSP-------------SPPPLDLTT-------------PPPPSSQSALQLSALGYPYHQHYI 274
            ..:|.|             :|.....||             ||.|    .:.||....|.|....
Mouse   310 LISDRPESCRRPGKRGEPKAPMLTHATTVAMAHSCLAISQLPPKP----LMTLSLQSVPLHHQLQ 370

  Fly   275 GQ--FFNRSSAPGMTHYSPPDPALLMQRQEANNLDQTIQPTQLQQPHSHH--QHFAYINSTTTTT 335
            .|  ....|.||..|   ||..||           .::.|..|.||....  ..|..|||...|.
Mouse   371 PQAHLAPDSPAPAQT---PPLHAL-----------PSLSPGPLPQPAMGRVPGDFLNINSDMNTE 421

  Fly   336 I-------------ANMFSQTRKRQFDVASLLA--------------------------PDVQIV 361
            :             .|::.:.::..|.:.:|.|                          ||||:.
Mouse   422 VDALDPSIMDFALQGNLWEEMKEDSFSLDTLEAFGDSPLGCDLGAPSLTPVSGNSDQSFPDVQVT 486

  Fly   362 DIVSEDQESSVTPTTSARTTTQ 383
            .:.:....::.....||..:.|
Mouse   487 GLYAAYSTAADGVAPSAANSAQ 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd102CNP_651951.1 FH_FOXQ2-like 129..223 CDD:410809 39/103 (38%)
Foxn4NP_683737.2 FH_FOX 192..297 CDD:469596 39/104 (38%)
FAM75 321..>401 CDD:464237 21/97 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..406 13/48 (27%)

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