DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyf and SMY2

DIOPT Version :9

Sequence 1:NP_001162827.1 Gene:Gyf / 43842 FlyBaseID:FBgn0039936 Length:1574 Species:Drosophila melanogaster
Sequence 2:NP_009731.4 Gene:SMY2 / 852470 SGDID:S000000376 Length:740 Species:Saccharomyces cerevisiae


Alignment Length:1066 Identity:191/1066 - (17%)
Similarity:325/1066 - (30%) Gaps:411/1066 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 SVDNAASLQRSISTVATLSTDRTGNNKGSGIGAAEGVGSISHPRLSSSKISQLWTVNNAAGVDAD 343
            |||...:....:||:...|.....||....:.|                     :||...|....
Yeast    24 SVDTENNNTHGVSTILDSSPASVNNNTNGAVAA---------------------SVNTVPGSTFR 67

  Fly   344 ENLPEWAIENPSKLGGSFDASGAFHGDTDLKPIKSSHNTLKTKSLDSYDDVKRPKSKDLSDPDSG 408
            .|.|        .|||                   .|...:|.||.....::|..|         
Yeast    68 SNTP--------LLGG-------------------RHPLSRTSSLIDSIGIQRAAS--------- 96

  Fly   409 NDITPETSLTKDTNTTAVQEEVESSLSPISSTTTKEVIHGDISDRIKEVADEVEKLIMDDDHKIS 473
                |.:|:.            |..:...|...:....|||                 ..:.::|
Yeast    97 ----PFSSMK------------EPFIPQSSGVMSSSFWHGD-----------------HPESRVS 128

  Fly   474 SNQSQH------QNHDGFTAALPRMADIEINVKPSVTAVHRQAPSTMPIQITPTITDVAPPSHAV 532
            :...||      ::...|:.|    |::.:|:     :.|     ::.:.|||..|..|..|| |
Yeast   129 TPVQQHPLLQRNESSSSFSYA----ANLGVNL-----STH-----SLAVDITPLSTPTAAQSH-V 178

  Fly   533 VSFSDHETMQHHNMHHLPQFPMIPTPHIITPNLNELWFYRDPQANVQGPFSAVEMTEWYRAGYFN 597
            ..|...:...:.:|:.:.|   :|.|    .::...|.|.|.|..:.|||:...|::||..|||.
Yeast   179 NLFPSSDIPPNMSMNGMSQ---LPAP----VSVESSWRYIDTQGQIHGPFTTQMMSQWYIGGYFA 236

  Fly   598 ENLFVRRYS--------DNRFRPLGELIKFC--HGNMPFTHSHLLPSPIELENIPVGQIPAPLTA 652
            ..|.:.|..        ::.|..||||:...  :...|||         ..:.:.| |..:..:.
Yeast   237 STLQISRLGSTPETLGINDIFITLGELMTKLEKYDTDPFT---------TFDKLHV-QTTSSDSI 291

  Fly   653 SLSITPHKPSPIPIALSVVEQQLQQQRDEQLKANVTATAEALRAAIKGSFGGNSIGNTSHLLTMR 717
            :|::.|:                             |:..|....||.                 
Yeast   292 NLNLAPY-----------------------------ASGVAATGTIKA----------------- 310

  Fly   718 FQMLQDQYIQHQEYQILAELSKNECFQRLS-----AVEQETVVRRKVQLLGLPEYLISLNGLSNS 777
                                ::|:.|:.|:     .::..|..:      |:...|.|...:|.:
Yeast   311 --------------------TENDIFKPLTHDNIWDMDGGTTSK------GVDIKLASATTISQT 349

  Fly   778 LSVLNPVAGRQLYRA--VVEHAKKDQQHIFANTEQQRSVGNLLDANNFILNAQIMIQQSQQEVGP 840
                 ..:.:|.|::  ::|..||::....|..        |||               :||   
Yeast   350 -----DESHKQEYKSTTMLEKGKKEKSESVAKA--------LLD---------------EQE--- 383

  Fly   841 LVSSVDCIMQGGTAADLNKPNEIPRNELDLINEYNLRMLLRGQPTSTQQQPPALTNSATENLPGV 905
                             .:..|:.|.|                                      
Yeast   384 -----------------KRNRELKRKE-------------------------------------- 393

  Fly   906 DFLTETQLLERQNLMIPIWLPPNNNKQQETDQQWAEMSNADASLWETANLNEERNEDQQLLIQKS 970
                |.:|.::|             ||:|.|                  |.:::.|.::   ||.
Yeast   394 ----EARLSKKQ-------------KQKEDD------------------LLKKQKEQKE---QKE 420

  Fly   971 SEACFADTE-KDVKIAQLFQVQSGNVVNHTALEELDQSPQN-----LKGSHNQKI---VKSLVSD 1026
            .||..|:.: |..|..:..|.|:........|..|:.|..|     .|...|..|   :|:.||.
Yeast   421 KEALEAEKQKKSEKTKKDTQTQTEGFKTSKDLPSLNSSSANPAPWASKVKVNNAIETSIKNGVSS 485

  Fly  1027 IQQNHNEELNSHQHQVK-QANKQNLNTKQNAAQSALKPINNENDRKREQTEEKKRQREERKRQQL 1090
            ..:...|.|...|...| :..|:.|.:..|.|..:..|.|...|.|.:..:..|..:|....::|
Yeast   486 TGKKKGEPLGLQQRNSKEEKQKEELKSVLNWANKSSLPSNQTIDIKSQFQKSPKGMKESSPLKEL 550

  Fly  1091 EDDKRRALNESEEQTRQIQEEKERQQQIQAQRRKALLGNVHSLSVQNGMS--GTLASAQSKKNDD 1153
            ||.     |..|||.:..::.:...:|:::....:...:..:.....|.:  ||:.|..||.|..
Yeast   551 EDP-----NFIEEQKKLWEKVQSSSKQVKSTSSASTTTSSWTTVTSKGKAPIGTVVSPYSKTNTS 610

  Fly  1154 ------AKTAEPQVSSRLPS-TSVAP------WSFQLQNSMRSAPGLAEIQKAERRERRADQQRH 1205
                  |||:....::...| .:|:|      |   .::.|:...|:......|...........
Yeast   611 LNSSLTAKTSTTSTTTTFASMNNVSPRQEFIKW---CKSQMKLNSGITNNNVLELLLSLPTGPES 672

  Fly  1206 QELLDKQLRANAAAAAEANDALLKWQSTPASAPVMSLAEIQAEEARRLANDLVDRQRRRELEHHQ 1270
            :||:.:.:.||                    :.||        :.||.|.:.:  :||...|...
Yeast   673 KELIQETIYAN--------------------SDVM--------DGRRFATEFI--KRRVACEKQG 707

  Fly  1271 QAPLS-SAVLVTSATSNIWGNANKAW 1295
            ..||| :..|..|      ||.:..|
Yeast   708 DDPLSWNEALALS------GNDDDGW 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GyfNP_001162827.1 GYF 566..621 CDD:238027 20/64 (31%)
PKK 998..1112 CDD:289257 31/122 (25%)
SMY2NP_009731.4 GYF 205..261 CDD:238027 16/55 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 42 1.000 Domainoid score I3209
eggNOG 1 0.900 - - E1_KOG1862
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 99 1.000 Inparanoid score I1463
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001680
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14445
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R738
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.080

Return to query results.
Submit another query.