DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyf and AT2G18090

DIOPT Version :10

Sequence 1:NP_001162827.1 Gene:Gyf / 43842 FlyBaseID:FBgn0039936 Length:1574 Species:Drosophila melanogaster
Sequence 2:NP_849971.1 Gene:AT2G18090 / 816321 AraportID:AT2G18090 Length:824 Species:Arabidopsis thaliana


Alignment Length:608 Identity:116/608 - (19%)
Similarity:215/608 - (35%) Gaps:160/608 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 SKLGGSFDASGAFHGDTDLKPIKSSHNTLKTKSLDSYDDVKRPKSKDLSDPDSGNDITPETSLTK 419
            |.||.|.|::.:.   .|..|..:|..|..|..|  .|.|...|:.|:|            .|:|
plant   270 SNLGPSLDSNCSL---GDRLPQLTSAATWATNEL--LDFVGYMKNGDIS------------VLSK 317

  Fly   420 -DTNTTAVQEEVESSLSPISSTTTKEVIHGDISDRI--KEVADEVEKLIMDDDHKISSNQSQHQN 481
             |..|..::....::|.  :|....|::......|:  ||..|.:|.|.:.|.|.|  :|.:...
plant   318 YDVQTLVLEYVRRNNLQ--NSPQNSEIMCDSKLMRLFGKERVDNLEMLKLLDSHFI--DQVRSPV 378

  Fly   482 HDGFTAALPRMADIEINV-----KPSVTAVHRQAPSTM----PIQITPTITDVAPPSHAVVSFSD 537
            .|.....:......::|.     :.:.:..|::..|..    .||:.|:.:|  ..:||||....
plant   379 TDNSAGGVTETMSYQVNAGRSCDRLNTSEQHQEGESQQLNGHSIQVRPSSSD--SRNHAVVKPDT 441

  Fly   538 HETMQHHNMHHLPQFPMIPTPHIITPNLNELWFYRDPQANVQGPFSAVEMTEWYRAGYFNENLFV 602
            ..|:.:..:..|              :.|.:|.|.||...:.||||...:.:|..:|:|...|.:
plant   442 SATLSNKPIDGL--------------DTNMVWLYGDPDGKIHGPFSLYNLRQWNSSGHFPPELRI 492

  Fly   603 RRYSDNRFRPLGELIKFCHGNMPFTHSHLLPSP-----------IELENIPVGQIPAPLTASLSI 656
            .|        |||.          .||.:|.:.           ::..:||..::    ||:::.
plant   493 WR--------LGEQ----------QHSSILLTDALNGQFHKTGLLQNHSIPKQEV----TATIAN 535

  Fly   657 TPHKPSPIPIALSVVEQQLQQQRDEQLKANVTATAEALRAAIKGSFGGNSIGNT-SHLLTMRFQM 720
            ..::    .:|:..:|.::.......:..:.:..:.:.....:.|...|..||. ||.:.:.|.:
plant   536 DQNR----SVAVPKIESRILDFSPNSVCTDQSVISSSNSVITRSSDVSNKSGNNCSHAVPLDFSL 596

  Fly   721 LQDQYIQHQEYQILAELSKNECFQRLSAVEQETV------VRRKVQLLGLPEYLISLNGLSNSLS 779
                                       :.|::||      .:|||:               :||.
plant   597 ---------------------------SNERDTVGFISLWDKRKVE---------------SSLL 619

  Fly   780 VLNPVAGRQLYRAVVEHAKKDQQHIFANTEQQRSVGNLLDANNFILNA----QIMIQQSQQEVGP 840
            |.:|::      ..:..|...:....:....:|......|.|:....|    ..:...::::|..
plant   620 VQSPIS------CSLSLATLPRNSNCSLPPHERWSAGQTDGNSAATTACNQNGSLSGSAEKQVTA 678

  Fly   841 LVSSVDCIMQGGTAADLNKPN---------EIPRN-ELDLINEYNLRMLLRGQPTSTQQQP-PAL 894
            .|.|  |......|...:..|         ..|.| |:|.::.::.........|:|..|| .|.
plant   679 TVQS--CGQNWNAATPSSASNVWDSNSGLTSFPDNQEIDFLDLFSPTFKFNFASTTTDWQPIVAG 741

  Fly   895 TNSATENLPGVDFLTETQLLERQ 917
            .:...|::.  |.|.|.:.:|.|
plant   742 PDECDESVS--DLLAEVEAMESQ 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GyfNP_001162827.1 GYF 569..613 CDD:460496 13/43 (30%)
Mplasa_alph_rch <931..>1113 CDD:275316
AT2G18090NP_849971.1 PHD5_NSD 81..126 CDD:277043
SWIB-MDM2_like 295..370 CDD:349489 21/90 (23%)
GYF 457..512 CDD:214666 19/72 (26%)
Blue background indicates that the domain is not in the aligned region.

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