DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyf and GIGYF2

DIOPT Version :10

Sequence 1:NP_001162827.1 Gene:Gyf / 43842 FlyBaseID:FBgn0039936 Length:1574 Species:Drosophila melanogaster
Sequence 2:NP_001096617.1 Gene:GIGYF2 / 26058 HGNCID:11960 Length:1320 Species:Homo sapiens


Alignment Length:1745 Identity:408/1745 - (23%)
Similarity:631/1745 - (36%) Gaps:605/1745 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TDSMKFGPEWLRNMSAEPSGSPSTYNVGNAAQNNSIGGHNLGNNTAASASRNLFPEYRYGREEML 66
            |.::.|||||||.:|:                    ||.......:.:..:....:|||||||||
Human     5 TQTLNFGPEWLRALSS--------------------GGSITSPPLSPALPKYKLADYRYGREEML 49

  Fly    67 SLFDRNCLLPQIL--PSFKKLFVEKVQCPLALTPSSEEDINQNSLGNNSRPAWLQRSPSGFGSAS 129
            :||.::..:|..|  ..|..:..|:...||||.|.:||:....|:..|| .|.|:.:..|.|...
Human    50 ALFLKDNKIPSDLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNS-AAVLRLTGRGGGGTV 113

  Fly   130 RGSGRGGTVDRGRMRGKSAYHPIYQRPSGLYDESLSVISKA-------ERTWSDRNGTGDSAATT 187
            .|:.||.:..|||.||:... ..|||.   :||...|..:.       .::|.:|   ||.....
Human   114 VGAPRGRSSSRGRGRGRGEC-GFYQRS---FDEVEGVFGRGGGREMHRSQSWEER---GDRRFEK 171

  Fly   188 TSTSGSGALDW-----------------------NGTPSSSPRKDYSNNHRNL----ENWRRTRN 225
            ......|..:.                       .|.|:|..||     |..:    ||||..|.
Human   172 PGRKDVGKKNGYYCMYSPVLLLGQPLCQGRPNFEEGGPTSVGRK-----HEFIRSESENWRIFRE 231

  Fly   226 EDGSGDGPSSSGSMSGPDIAGWRSGVVGGSTNAGFGTNSHRW-------GRSTSWRDEDPSVDNA 283
            |....|           :..|||   :.||...|     .||       .||..||:.       
Human   232 EQNGED-----------EDGGWR---LAGSRRDG-----ERWRPHSPDGPRSAGWREH------- 270

  Fly   284 ASLQRSISTVATLSTDRTGNNKGSGIGAAEGVGSISHPRLSSSKISQLWTVNNAAGVDADENLPE 348
            ...:|..........|..|..:     ...|.|||...|                     ::|||
Human   271 MERRRRFEFDFRDRDDERGYRR-----VRSGSGSIDDDR---------------------DSLPE 309

  Fly   349 WAIENPSKLGGSFDASGAF-------------HGDTDLKPI---------KSSHNTLKTKSLDSY 391
            |.:|:..:..|:||:||||             ..:.|.:|:         :.|||          
Human   310 WCLEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVDEGEECSDSEGSHN---------- 364

  Fly   392 DDVKRPKSKDLSDPDS------GNDITPETSLTKDTNTTAVQEEVESSLSPISSTTTKEVIHGDI 450
            ::.|.|...:..:.:.      .::.||:||              .||..|           |..
Human   365 EEAKEPDKTNKKEGEKTDRVGVASEETPQTS--------------SSSARP-----------GTP 404

  Fly   451 SDRIKEVADEVEKLIMDDDHKISSNQSQHQN---HDGFTAALP-----RMADIE--INVKPSVTA 505
            ||...:.|.:.|:   .|:.|....:...:.   .:...|.:|     .:||::  ::..||.||
Human   405 SDHQSQEASQFER---KDEPKTEQTEKAEEETRMENSLPAKVPSRGDEMVADVQQPLSQIPSDTA 466

  Fly   506 ---------VHRQAPSTMPIQITPTITDVAPPSHAVVSF--SDHETMQHHN-------------- 545
                     |...:|:..|:: ||.   |..|....||.  .|.|.::|..              
Human   467 SPLLILPPPVPNPSPTLRPVE-TPV---VGAPGMGSVSTEPDDEEGLKHLEQQAEKMVAYLQDSA 527

  Fly   546 ----------MHHLPQFPMIPTPHIITPNLNELWFYRDPQANVQGPFSAVEMTEWYRAGYFNENL 600
                      ..|..:...||..|    ...:.|:|:|||..:||||:..||.||::||||..:|
Human   528 LDDERLASKLQEHRAKGVSIPLMH----EAMQKWYYKDPQGEIQGPFNNQEMAEWFQAGYFTMSL 588

  Fly   601 FVRRYSDNRFRPLGELIKFCHGNMPFTHSHLLPSPIELENIPVGQIPAPLTASLSITPHKPSPIP 665
            .|:|..|..|:|||:::|. .|.:||       ||        |..|.|....|.          
Human   589 LVKRACDESFQPLGDIMKM-WGRVPF-------SP--------GPAPPPHMGELD---------- 627

  Fly   666 IALSVVEQQLQQQRDEQLKANVTATAEALRAAIKGSFGGNSIGNTSHLLTMRFQMLQDQYIQHQE 730
                  :::|.:|::                                 ||..:||      ||.:
Human   628 ------QERLTRQQE---------------------------------LTALYQM------QHLQ 647

  Fly   731 YQILAELSKNECFQRLSAVEQETVVRRKVQLLGLPEYLISLNGLSNSLSVLNPVAGRQLYRAVVE 795
            ||                                 ::||                 :|.|..|: 
Human   648 YQ---------------------------------QFLI-----------------QQQYAQVL- 661

  Fly   796 HAKKDQQHIFANTEQQRSVGNLLDANNFILNAQIMIQQSQQEVGPLVSSVDCIMQGGTAADLNKP 860
               ..||....:::||:.:..||....     .:.::.|.|.:.|.|:....:...|:..:|   
Human   662 ---AQQQKAALSSQQQQQLALLLQQFQ-----TLKMRISDQNIIPSVTRSVSVPDTGSIWEL--- 715

  Fly   861 NEIPRNELDLINEYNLRMLLRGQPTSTQQQPPALTNSATENLPGVDFLTETQLLERQNLMIPIWL 925
                                  |||::  ||......:..:|| :|..|....||:..     .|
Human   716 ----------------------QPTAS--QPTVWEGGSVWDLP-LDTTTPGPALEQLQ-----QL 750

  Fly   926 PPNNNKQQETDQQWAEMSNADASLWETANLNEERNEDQQLLIQKSSEACFADTEKDVKIAQLFQV 990
            ......:.|.:::.|||         .|...||..:.|:.|.::..|......|::.|       
Human   751 EKAKAAKLEQERREAEM---------RAKREEEERKRQEELRRQQEEILRRQQEEERK------- 799

  Fly   991 QSGNVVNHTALEELDQSPQN--LKGSHNQKIVKSLVSDIQQNHNEELNSHQHQVKQANKQNLNTK 1053
                   ....|||.:..|.  |:....|:|...     :|...||....:..:::..::....:
Human   800 -------RREEEELARRKQEEALRRQREQEIALR-----RQREEEERQQQEEALRRLEERRREEE 852

  Fly  1054 QNAAQSALKPINNENDRKREQTEEKKRQREERKRQQLEDDKRRALNESEEQTR---QIQEEKE-- 1113
            :...|..|.....|...|..:.||:.::|.|..|.::|::..|..:|.||:.|   ::|.:||  
Human   853 ERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELM 917

  Fly  1114 --RQQQIQAQRRKALLGNVHSLSVQNGMSGTLASAQSKKNDDAKTAEPQVSSRLPSTSVAPWSFQ 1176
              ||||.:|.||                   |...|.:        :.....:|||:|.  |..|
Human   918 RQRQQQQEALRR-------------------LQQQQQQ--------QQLAQMKLPSSST--WGQQ 953

  Fly  1177 LQNS---MRSAPGLAEIQK-AERRER--RADQQRHQELLDKQLRANAAAAAEANDALLKWQS-TP 1234
            ...:   .::...|||||| .|.|||  |.:|:|.|..|.|.|:..   ..:....|..|.: :.
Human   954 SNTTACQSQATLSLAEIQKLEEERERQLREEQRRQQRELMKALQQQ---QQQQQQKLSGWGNVSK 1015

  Fly  1235 ASAPVMSLAEIQAEEARRLANDLVDRQRRRELEHHQQAPL---SSAVLVTSATSNIWGNAN---- 1292
            .|....||.|||.||||::     .:|::::.:|.|....   :.:.|.||..:::||:.|    
Human  1016 PSGTTKSLLEIQQEEARQM-----QKQQQQQQQHQQPNRARNNTHSNLHTSIGNSVWGSINTGPP 1075

  Fly  1293 KAWSSSAAQSL---SLKTSSGTGLWDEPNPLGSNGSGTSGTSSVTAAAVLAGGLNSANKSTLQAQ 1354
            ..|:|....|:   :...:|..|.||:                   |....|..||.||      
Human  1076 NQWASDLVSSIWSNADTKNSNMGFWDD-------------------AVKEVGPRNSTNK------ 1115

  Fly  1355 NKSSALFASPRNLRKSQTLPALSNPEKSNKNGPGQRPEKQKLAQTRSKGAAVSIEEKDRERKLNA 1419
            ||::|      :|.||   ..:||  :.||                      .:||:::..||  
Human  1116 NKNNA------SLSKS---VGVSN--RQNK----------------------KVEEEEKLLKL-- 1145

  Fly  1420 KSQQSSTDQAISKVNEYENEFTSWCIKSLD--NMSAKVDVPTFVAFLQDLEAPYEVKDYVRIYLG 1482
                      ...||:.::.||.||.:.|.  |.:..:||||||:||:::|:||||.||:|.|||
Human  1146 ----------FQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFVSFLKEVESPYEVHDYIRAYLG 1200

  Fly  1483 DGKDSLDFAKQFLERRSKYKSLQRAQKAHNDDMCKPAPAITP-------------------SAND 1528
            |..::.:|||||||||:|.|:.|:.|:.......:..|...|                   |...
Human  1201 DTSEAKEFAKQFLERRAKQKANQQRQQQQLPQQQQQQPPQQPPQQPQQQDSVWGMNHSTLHSVFQ 1265

  Fly  1529 YADSKNKQ---------KKIKKNKMTKMDARILGFSVTAAEGRINVG----IRDY 1570
            ...|.|:|         ||.||.||.:.|..:|||||.|:..|:|:|    :.||
Human  1266 TNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETLDDY 1320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GyfNP_001162827.1 GYF 569..613 CDD:460496 22/43 (51%)
Mplasa_alph_rch <931..>1113 CDD:275316 38/186 (20%)
GIGYF2NP_001096617.1 4EHP-binding motif. /evidence=ECO:0000269|PubMed:22751931 40..50 8/9 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..131 8/18 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..269 12/51 (24%)
DDX6 binding motif. /evidence=ECO:0000269|PubMed:31439631 302..332 13/50 (26%)
GYF 554..609 CDD:238027 26/55 (47%)
Required for GRB10-binding. /evidence=ECO:0000250 568..584 9/15 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 754..814 16/82 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 866..887 6/20 (30%)
Required for interaction with SARS-CoV-2 non-structural protein 2 (nsp2). /evidence=ECO:0000269|PubMed:35878012 881..940 21/85 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 893..912 5/18 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 938..957 6/20 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 978..1018 11/42 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1030..1069 10/43 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1105..1133 13/44 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1216..1251 7/34 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1268..1292 9/23 (39%)

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