DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyf and T13G4.1

DIOPT Version :10

Sequence 1:NP_001162827.1 Gene:Gyf / 43842 FlyBaseID:FBgn0039936 Length:1574 Species:Drosophila melanogaster
Sequence 2:NP_508224.1 Gene:T13G4.1 / 188482 WormBaseID:WBGene00020488 Length:163 Species:Caenorhabditis elegans


Alignment Length:144 Identity:31/144 - (21%)
Similarity:58/144 - (40%) Gaps:40/144 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   570 FYRDPQANVQGPFSAVEMTEWYRAGYFNENLFVRRYSDNRFRPL-----GELIKF--CHGNMPFT 627
            ||.|.:.|||||:.|..:..|||.|:|::        |::|:.:     |||:.:  ..|::...
 Worm    11 FYIDDEDNVQGPYGAKHVLGWYRNGHFHD--------DHQFKIVDCAQHGELVTYEAYLGDLKSR 67

  Fly   628 HSHLLPSPIELENI--------------PVGQIPAPLTASLSITPHKPSPIPIALSVVEQQLQQQ 678
            .....|.|.::|..              |:.  ..|:.::....|.:..|       .|:::.:.
 Worm    68 FGVEAPIPTKMEQFQFRGFLLTPKSNKKPIS--GGPMDSTSDEVPEETGP-------TEEKMDEN 123

  Fly   679 RDEQLKANVTATAE 692
            .:..  :||....|
 Worm   124 HEND--SNVVRKDE 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GyfNP_001162827.1 GYF 569..613 CDD:460496 16/42 (38%)
Mplasa_alph_rch <931..>1113 CDD:275316
T13G4.1NP_508224.1 GYF 7..65 CDD:238027 20/61 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.