DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyf and gigyf2

DIOPT Version :9

Sequence 1:NP_001162827.1 Gene:Gyf / 43842 FlyBaseID:FBgn0039936 Length:1574 Species:Drosophila melanogaster
Sequence 2:XP_002933400.2 Gene:gigyf2 / 100487831 XenbaseID:XB-GENE-5870324 Length:1309 Species:Xenopus tropicalis


Alignment Length:1719 Identity:387/1719 - (22%)
Similarity:641/1719 - (37%) Gaps:564/1719 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TDSMKFGPEWLRNMSAEPSGSPSTYNVGNAAQNNSIGGHNLGNNTAASASRNLFPEYRYGREEML 66
            |.::.|||||||.:|:                    ||..:....:.:..:....::||||||||
 Frog     5 TQTLNFGPEWLRALSS--------------------GGSVISPPLSPALPKYKLADFRYGREEML 49

  Fly    67 SLFDRNCLLPQIL--PSFKKLFVEKVQCPLALTPSSEEDINQNSLGNNSRPA--WLQRSPSGFGS 127
            :|:.::..:|..|  ..|..:..::...||||.|.:||:....|:..||...  ...|..||.|.
 Frog    50 ALYVKDNKVPLDLLDKEFLPILNDEPLLPLALVPFTEEEQRNFSMSVNSAAVLRLTNRGSSGGGG 114

  Fly   128 ASRGS--GRGGTVDRGRMRGKSAYHPIYQRPSGLYDESLSVISKAER------TWSDRNGTGDS- 183
            ...|:  ||..:..|||.||:|.:   |||.   :||..|...:..|      :|.:|   ||. 
 Frog   115 TVVGAPRGRSSSRGRGRGRGESGF---YQRS---FDEVESGFGRGAREMHRSQSWEER---GDRR 170

  Fly   184 -AATTTSTSGSGALDWNGTPSSSPRKDY----SNNHRNLENWRRTRNEDGSGDGPSSSGSMSGPD 243
             ...|.........:..||..:..:.::    |.|.|:|........|:|.|...:|:....|  
 Frog   171 FEKPTRKEPVRPTFEEGGTAPAGRKHEFIRSESGNWRSLREEMNGEEEEGGGVWRASAPRRDG-- 233

  Fly   244 IAGWRSGVVGGSTNAGFGTNSHRWGRSTSWRDEDPSVDNAASLQRSISTVATLSTDRTGNNKG-S 307
             ..|||....|:             |.:.||:       ....:|..........|..|..:. |
 Frog   234 -ERWRSHSPDGA-------------RGSGWRE-------IPDRRRRFDYDLREREDERGYRRARS 277

  Fly   308 GIGAAEGVGSISHPRLSSSKISQLWTVNNAAGVDADENLPEWAIENPSKLGGSFDASGAFHGDTD 372
            |.|:||                           |..::||||.:::.....|:||:||||     
 Frog   278 GSGSAE---------------------------DERDSLPEWCLDDAEDETGTFDSSGAF----- 310

  Fly   373 LKPIKSSHNTLKTKSLDSYDDVKRPKSKDLSDPDSGNDITPETSLTKDTNTTAVQEEVESSLSPI 437
                      |.:|..........|:.::|       |..|......::::...|.|......|:
 Frog   311 ----------LSSKPSKKVQKEPIPEEQEL-------DFRPSMDGADNSDSDGSQTEEAKETDPV 358

  Fly   438 SSTTTKEVIHGDISDRIKEVADEVEKLIMDDDHKISS------NQSQHQNHDGFTAALPRMA-DI 495
            .|.|..::.....:         |.:.....||:|.|      ..|:..|.   .||.|.:: ..
 Frog   359 QSRTDNDLSRNGYT---------VVQATSSPDHRIPSPVPRTDKTSETANQ---KAASPHLSCKT 411

  Fly   496 EINVK------PSVTAVHRQAPSTMPIQ-----ITPTITDVAPPSHAVVSFSDHETMQHHNMHHL 549
            ||:|:      |...:.|::..:::..|     .:|.|..  |||.|   ||.....:..:.|.:
 Frog   412 EIDVRSQSPSSPPTPSKHKEDAASLSHQGSQEKSSPCIPH--PPSPA---FSQRSPARQPDPHKV 471

  Fly   550 PQFPMIPTPHIITPNL------------------------------------------------- 565
            |....:|.|.:.||.:                                                 
 Frog   472 PAMSSVPVPQLDTPTVPAHSTVCAAPGMEPMPPEPDEEDGLEHLEQQAQQMVAYLQDGTLDDDRL 536

  Fly   566 ----------------NELWFYRDPQANVQGPFSAVEMTEWYRAGYFNENLFVRRYSDNRFRPLG 614
                            .:.|:|:|||..:|||||..||.|||:||||...|.:||..|:.|:.||
 Frog   537 LVKVLDQRVKGPSLDNQQKWYYKDPQGEIQGPFSNREMAEWYQAGYFPMTLLLRRVCDDAFQSLG 601

  Fly   615 ELIKFCHGNMPFTHSHLLPSPIELENIPVGQIPAPLTASLSITPHKPSPIPIALSVVE-QQLQQQ 678
            ::|| ..|.:||:                             ||    |.|..|..:: ::|.:|
 Frog   602 DIIK-KWGRVPFS-----------------------------TP----PTPTRLGDLDPERLSRQ 632

  Fly   679 RDEQLKANVTATAEALRAAIKGSFGGNSIGNTSHLLTMRFQMLQDQYIQHQEYQILAELSKNECF 743
            ::      :||                 :....||   |:|    |::..|:|.:||:..|    
 Frog   633 QE------ITA-----------------LYQMHHL---RYQ----QFLFQQQYAVLAQQQK---- 663

  Fly   744 QRLSAVEQETVVRRKVQLLGLPEYLISLNGLSNSLSVLNPVAGRQLYRAVVEHAKKDQQHIFANT 808
            ..||:.:|:..:..:...:.:||:           :|:.|||     ||:             :.
 Frog   664 AALSSQQQQLPLPLQSLSMRIPEH-----------TVIPPVA-----RAL-------------SV 699

  Fly   809 EQQRSVGNLLDANNFILNAQIMIQQSQQEVGPLVSSVDCIMQGGTAADLNKPNEIPRNELDLINE 873
            ....|:..|                      |..::...:.:|.:..||  |.|           
 Frog   700 PDSTSLWEL----------------------PPAAAQPAVWEGSSVWDL--PVE----------- 729

  Fly   874 YNLRMLLRGQPTSTQQQPPALTNSATENLPGVDFLTETQL-LERQNLMIPIWLPPNNNKQQETDQ 937
                              ||...:..|.|..::.:...:: .||:...:       ..||:|.:|
 Frog   730 ------------------PANQGTTREQLEQMEKVKAAKMEQERREAEL-------RAKQEEEEQ 769

  Fly   938 QWAEMSNADASLWETANLNEERNEDQQLLIQKSSEACFADTEKDVKIAQLFQVQSGNVVNHTALE 1002
            :..:         |.....:.|.|::||..:|..|.    ..:..::|...|::          |
 Frog   770 RRRQ---------EEEEERKRREEEEQLARRKQEET----LRRQKELALQKQME----------E 811

  Fly  1003 ELDQSPQNLKGSHNQKIVKSLVSDIQQNHNEELNSHQHQVKQANKQNLNTKQNAAQSALKPINNE 1067
            |..|..:.|:           :.:.::...||....:.::::..::....::...::..:....|
 Frog   812 EERQRKEELR-----------LLEERRRQEEERKRLEEEIRRQEEEKRRQEEERKRAEDEKRRRE 865

  Fly  1068 NDRKREQTEEKKRQREERKRQQ---------LEDDKRRALNE----SEEQTRQIQEEKERQQQIQ 1119
            .::|||  ||::|||||.:|:|         .|:..||.|.|    :||:.|:.:||.:||:::|
 Frog   866 EEKKRE--EEERRQREEIQRKQEEAARWAREEEEAARRLLEEARLKAEEEERKKREEAQRQKELQ 928

  Fly  1120 AQRRKALLGNVHSLSVQNGMSGTLASAQSKKNDDAKTAEPQVSSRLPSTSVAPWSFQLQ--NSMR 1182
            .||::              ....|...|.::..     :.....:|||:|.  |..|:.  .:.:
 Frog   929 RQRQQ--------------QQEALRRLQQQQQQ-----QQLAQMKLPSSST--WGQQVSPTTASQ 972

  Fly  1183 SAPGLAEIQKAERRERRADQQRHQELLDKQLR--ANAAAAAEANDALLKWQSTPASAPV---MSL 1242
            ||..||||||.|....|...|.||....::|:  .......:....:..|.|  .|.||   .||
 Frog   973 SALSLAEIQKLEEERERQQLQEHQRRQQQELKILQQQQQQQQQQQKIPGWGS--VSKPVGSTKSL 1035

  Fly  1243 AEIQAEEARRLANDLVDRQRRRELEHHQQAPLS-------SAVLVTSATSNIWGNANK----AWS 1296
            .|||.||||::..  ..:|..|....:...|::       |:..|..:.|::||:.|.    .||
 Frog  1036 LEIQQEEARQMQK--TQQQPVRNRPANISVPVAPVVNNHISSTSVAGSGSSVWGSLNNNLSPQWS 1098

  Fly  1297 SSAAQSLSLKT---SSGTGLWDEPNPLGSNGSGTSGTSSVTAAAVLAGGLNSANKSTLQAQNKSS 1358
            |.:..|:...|   .|..|.||:            ....||.....:...|:|:||.        
 Frog  1099 SDSMSSIWSSTEVKGSSVGFWDD------------AVKEVTPRNATSKNKNTASKSA-------- 1143

  Fly  1359 ALFASPRNLRKSQTLPALSNPEKSNKNGPGQRPEKQKLAQTRSKGAAVSIEEKDRERKLNAKSQQ 1423
                                       ||..|..|:             :|::::..:|      
 Frog  1144 ---------------------------GPNSRQSKK-------------VEQEEKLLRL------ 1162

  Fly  1424 SSTDQAISKVNEYENEFTSWCIKSLD--NMSAKVDVPTFVAFLQDLEAPYEVKDYVRIYLGDGKD 1486
                  ....|:.::.||.||.::|.  |.:..:||||||:||:::|:||||.||||.||||..:
 Frog  1163 ------FQGANKCQDGFTQWCEQTLHAINTAHSLDVPTFVSFLREVESPYEVHDYVRAYLGDTPE 1221

  Fly  1487 SLDFAKQFLERRSKYKSLQRAQKAH-NDDM----CKPAPAIT-PSANDYADSKNKQKKIKKNKMT 1545
            :.||:|||:|||:|    |:|.:.| ..|:    |:.:.|.: .:|.:.|....::|  ||.||.
 Frog  1222 AKDFSKQFIERRTK----QKASQQHPQQDVAWVTCQTSQANSQQTALEVAQCAGRKK--KKQKMV 1280

  Fly  1546 KMDARILGFSVTAAEGRINVG----IRDY 1570
            :.|..:|||||.|:..|:|:|    :.||
 Frog  1281 RADPSLLGFSVNASSERLNMGEIETVEDY 1309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GyfNP_001162827.1 GYF 566..621 CDD:238027 28/54 (52%)
PKK 998..1112 CDD:289257 28/126 (22%)
gigyf2XP_002933400.2 GYF 556..600 CDD:366985 24/43 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 169 1.000 Domainoid score I3770
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 297 1.000 Inparanoid score I2673
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001680
OrthoInspector 1 1.000 - - otm47767
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2990
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.050

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