DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unc-13 and Mctp2

DIOPT Version :9

Sequence 1:NP_001245427.1 Gene:unc-13 / 43841 FlyBaseID:FBgn0025726 Length:3186 Species:Drosophila melanogaster
Sequence 2:NP_001019874.1 Gene:Mctp2 / 244049 MGIID:2685335 Length:878 Species:Mus musculus


Alignment Length:728 Identity:133/728 - (18%)
Similarity:250/728 - (34%) Gaps:214/728 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1643 SPSESVKL--------RMSEVFKELKSVVSLNP-------------SVNNDATFEGV------PI 1680
            |||:.:.|        |:|....:|....:|.|             ||.|..:..|:      ..
Mouse    31 SPSKPLDLRVQHHLDRRLSLSVPDLLEAEALAPEGRPYSGPQSSYISVPNSLSTAGIVPKSSSSS 95

  Fly  1681 VKPTYEKL----ETVSDLHSAWQDVNGDLQIAASDIDSNEDLVGNKGRETPTYNKQRKLRRLKKK 1741
            :|.:.|:|    |..|.:|..             |.|| |::..:...|...::         :.
Mouse    96 LKQSEEELDWSQEEASHVHGV-------------DTDS-EEIYASPAEEWQAFS---------QS 137

  Fly  1742 TRD-RKINISKNATSSSSSCHSENECNTPLGQCTQKSVAEKDTNDISNKSEASSETSGPDTP-AE 1804
            ..| .|.::.::|.......|..::.|.        |:..:...:.|...|||...|...:| |.
Mouse   138 ALDLHKPSLGRDAPEEHDKTHGNDDLNA--------SMTSQHFEEESTLGEASDCVSHLPSPFAY 194

  Fly  1805 LSDVDISETENGLRADDGQNIDNMRGNSGS-----LLKVNRKYLLQFDVDHSLINQPLETSQYNT 1864
            |..:.:.|         |:|: .:|...|:     ..|:|.|.|.:..|.:..:|.         
Mouse   195 LLTIHLKE---------GRNL-VVRDRCGTSDPYVKFKLNGKTLYKSKVIYKNLNP--------- 240

  Fly  1865 HMLENITSASIPSQNRQIDSKTLMSQSSHADGSQAVGNETAVGLSSSKWKLLKTLKER------- 1922
             :.:.|....|.|.::::..|......:.:|            ...|.:.:|:.|:..       
Mouse   241 -IWDEIVVLPIQSLDQKLRVKVYDRDLTKSD------------FMGSAFVVLRDLELNRTTEHIL 292

  Fly  1923 KIEEKNNQDK------------IKEDEMIKDRDKN----GGGPGEV--GLRTNGHPGDNPFYSNI 1969
            |:|:.|:.:.            :|:.:..:.|..|    ......:  .||.:.....|..::.|
Mouse   293 KLEDPNSLEDDMGVIVLNLNLVVKQGDFKRHRWSNRKRLSASKSSLIRNLRLSESLRKNQLWNGI 357

  Fly  1970 DSMPDIRPRRKSIPLVSELVLKTMAATKRNAGLT---SAVPRATLNDEDLKMHVYKKALQALIYP 2031
            .|:..:..:..|...::|:.::.....:|....|   ||.|:.   .|....|.:...:..|...
Mouse   358 ISITLLEGKNVSGGNMTEMFVQLKLGEQRYKSKTLCKSANPQW---QEQFDFHYFSDRMGILDIE 419

  Fly  2032 I--SSTTPHNFLLWTA--------TSPTYCYE-----CEGLLWGIARQGVRCTEC-GVKCHEKCK 2080
            :  ..:..|...|.|.        .....|.|     |:|.|..:    :..|.| ||...:.| 
Mouse   420 VWGKDSKKHEERLGTCKVDISALPLKQDNCLELPLESCQGALLML----ITLTPCTGVSISDLC- 479

  Fly  2081 DLLNADCLQRAAEKSSKHGAEDKANSIITAMKDRMKQREREKPEIFELIRAVFSVEEKSHAGHMK 2145
                                       :...:|..::::..:...|:              ..:|
Mouse   480 ---------------------------VCPFEDPSERQQISQRYAFQ--------------NSLK 503

  Fly  2146 AVKQSVLDGTSKWSAKIAITVICAQGLIAKDKSGTSDPYVTVQVSKVKKRTRTMPQELNPVWNEK 2210
            .||...:         :.:.|:.|..|:|.|.||.|||:..:::...:.:|.|:.:.|||.||:.
Mouse   504 DVKDVGI---------LQVKVLKASDLLAADFSGKSDPFCLLELGNDRLQTHTIYKNLNPEWNKV 559

  Fly  2211 FHFECHNSSDRIKVRVWDEDNDLKSKLRQKLTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDK 2275
            |.|...:..|.::|.|:|||.|           ::.||||:..|.:.::.......|.|:.:..:
Mouse   560 FTFPIKDIHDVLEVTVFDEDGD-----------KAPDFLGKVAIPLLSIRDGQPNCYVLKNKDLE 613

  Fly  2276 SAVSGAIRLHISV 2288
            .|..|.|.|.:.:
Mouse   614 QAFKGLIYLELDL 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-13NP_001245427.1 C1 2038..2087 CDD:237996 13/62 (21%)
C2B_Munc13 2160..2286 CDD:175993 37/125 (30%)
DUF1041 2477..2584 CDD:283860
Membr_traf_MHD 2832..2992 CDD:287505
C2C_Munc13 3032..3152 CDD:176041
Mctp2NP_001019874.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..40 4/8 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..178 6/42 (14%)
C2A_MCTP_PRT 195..314 CDD:176007 23/150 (15%)
C2B_MCTP_PRT 357..469 CDD:176022 20/118 (17%)
C2C_MCTP_PRT 509..627 CDD:176023 37/138 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 728..752
PRT_C <771..>824 CDD:337028
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D234298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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