DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4G1 and LOC501116

DIOPT Version :9

Sequence 1:NP_001096852.1 Gene:eIF4G1 / 43839 FlyBaseID:FBgn0023213 Length:1919 Species:Drosophila melanogaster
Sequence 2:XP_017450861.2 Gene:LOC501116 / 501116 RGDID:1590774 Length:700 Species:Rattus norvegicus


Alignment Length:847 Identity:189/847 - (22%)
Similarity:326/847 - (38%) Gaps:243/847 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1148 GTVRFIGELFKISMLTGKIIYSCIDTLLNPHS----EDM---LECLCKLLTTVGAKFEKTPVNSK 1205
            |.::|||||.|:.::...|::.||.|||....    :||   |||||:::.|||.:.        
  Rat     3 GNIKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECLCQIMRTVGPRL-------- 59

  Fly  1206 DPSRCYSL-EKSITRMQAIASKTDKDGARVSSRVRFMLQDVIDLRKNKWQTSR---NEAPKTMGQ 1266
            |..|..|| ::...||.::....:     :.:|:||:|||.::||::.|...:   :..|||:.|
  Rat    60 DHERAKSLMDQYFARMCSLMLSKE-----LPARIRFLLQDTVELREHHWVPRKAFLDNGPKTINQ 119

  Fly  1267 IEKEA---------------KNEQL-------------------SAQYFGTLSSTTPG-GSQGGS 1296
            |.::|               :|:..                   .|..||.:    || |...|.
  Rat   120 IRQDAVKDLGVFIPAPMAQGRNDFFLEGPFMPPRMKMDRDPLGGLADMFGQM----PGCGIGTGP 180

  Fly  1297 GKRDDRGNSRYGESRSSSAYGG--------SHSQRGDNGNLRHQQQNNVGGNVSGGAGHSNGNND 1353
            |...||.:...|..||:..:.|        :.||.|:           :||......|.|     
  Rat   181 GVIQDRFSPTMGRHRSNQLFNGHGGHIMPPTQSQFGE-----------MGGKFMKSQGLS----- 229

  Fly  1354 ENTWHVQTSKGSRSLAVDSNKLEGLSKLSDQNLETKKMGGLTQFIWISSDTTRLSSAPTPTPSNP 1418
             ..:|.| |:|..|      :|:|.||  |......|.|.|      ::|...|..|.       
  Rat   230 -QLYHNQ-SQGLLS------QLQGQSK--DMPPRFSKKGQL------NADEISLRPAQ------- 271

  Fly  1419 FAVLSSLIDKNSNERDRDRSGPRNKGSYNKGSMERDRYDRGMHSRTGSSQGSRENSSSRGGQQGR 1483
                |.|::||...:                                             .|...
  Rat   272 ----SFLMNKNQVPK---------------------------------------------LQPQI 287

  Fly  1484 TLLSSSVQKSTSHSKYTQQAPPTRHTVKAQSSVGSSNVNTGPLYRGSEQQTSATFSQTTRSVAPV 1548
            |::..|.|...:      |.||...|.:.........:...|             ::|::...| 
  Rat   288 TMIPPSAQPPRT------QTPPLGQTPQLGLKTNPPLIQEKP-------------AKTSKKPPP- 332

  Fly  1549 AVFIEASETDLKLIKSVVSEIVDLSAASKEVTPGAVSCIK--RVPEKLRCSFIYYILTDYLHLA- 1610
                 :.|..|||.::||:|.::...|:     .|||.::  |.|:    .|:..:|:..:.|: 
  Rat   333 -----SKEELLKLTEAVVTEYLNSGNAN-----DAVSGVREMRAPK----HFLPEMLSKVIILSL 383

  Fly  1611 NVGKQYRRYLSIAVSQLIQQNYISADHLRLAYNEFTVYANDLIVDIPELWLYILQFAGPLIVKKI 1675
            :...:.:...|..:|.|.|:...::|:...|:.........|.||||....|:.|||...|:.::
  Rat   384 DRSDEDKEKASSLISLLKQEGIATSDNFMQAFLNVLEQCPKLEVDIPLEKSYLAQFAARAIISEL 448

  Fly  1676 LTISDLWNNNLKENSPSNVAKKFLKTYLIYCTQEVGPNFARNMWI-------KFNLKWSDFMPES 1733
            ::||:|       ..|......|  ...:.|.|::. |.....|:       |.|::  ..:|| 
  Rat   449 VSISEL-------AQPLESGTHF--PLFLLCLQQLA-NLQDQEWLTELLQQSKVNMQ--KMLPE- 500

  Fly  1734 EVADFIKFNRLEYVENESKS---PVIDHRETPEKHVKNVID----HIEHLLKEGTTADCIIDYSN 1791
              .|..|...||.:|.:..|   |::...:...|.:|  :|    .|...:|:..:....:|...
  Rat   501 --IDQNKDRMLEILEGKGLSFLFPLLKLEKELLKQIK--LDPSPQTIYKWIKDNISPKLHVDKGF 561

  Fly  1792 GNIMVVDKLFIRGLTETLSNFSIHYKDNS----YKLESE-----TFQKFCIPVLQRYIDSNEDHQ 1847
            .||::..  |::.::..:|..|.....:|    .:||.|     :|:    ||:|:::.::.|.|
  Rat   562 VNILMTS--FLQYISSEVSPPSDETDSSSAPSKEQLEQEKQLLLSFK----PVMQKFLHNHVDLQ 620

  Fly  1848 LECLYTLQLLVHGLEHPRGLLSELIGELYDAFVIQKESLCKWR-DSKDQSAGKGVAVKSLNPFFN 1911
            :..||.||:..:....|:|:|.......||..:|::|:...|: |...:..|||.|:..:|.:..
  Rat   621 VSALYALQVHCYNSRFPKGMLLRFFVHFYDMEIIEEEAFLAWKEDITQEFPGKGKALFQVNQWLT 685

  Fly  1912 SL 1913
            .|
  Rat   686 WL 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4G1NP_001096852.1 MIF4G 1004..1252 CDD:280935 37/111 (33%)
MA3 1562..1677 CDD:280933 28/117 (24%)
W2_eIF4G1_like 1764..1895 CDD:211397 34/144 (24%)
LOC501116XP_017450861.2 MIF4G <1..102 CDD:397130 37/111 (33%)
PRK12757 <229..>336 CDD:237191 32/208 (15%)
MA3 337..450 CDD:214714 31/121 (26%)
W2_eIF4G1_like 533..669 CDD:211397 33/143 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D594395at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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