DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF4G1 and Eif4g3

DIOPT Version :9

Sequence 1:NP_001096852.1 Gene:eIF4G1 / 43839 FlyBaseID:FBgn0023213 Length:1919 Species:Drosophila melanogaster
Sequence 2:XP_038965571.1 Gene:Eif4g3 / 298573 RGDID:1311370 Length:1807 Species:Rattus norvegicus


Alignment Length:2060 Identity:482/2060 - (23%)
Similarity:767/2060 - (37%) Gaps:587/2060 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AMQPH-SAQNMILPANKKTKKYDQQVPTSKPQSLHQPLQPQHSHPTAQPQFQINKAYNVVSILKA 80
            |..|| :.:.:..||       .||:|....|   |||:.:...||      ::..|:.|:    
  Rat    57 AAPPHPNIRALQTPA-------PQQIPRGPVQ---QPLEDRIFPPT------VSAVYSTVT---- 101

  Fly    81 SAQIAQQ---------SPHLTNQQHP-----PIHHPQQTQQHQQSYTNVVNRSLSASEPVRAQSS 131
              |:|:|         |.|..|:.||     |..|.......|..|.:..|          |..:
  Rat   102 --QVARQPGPPTPSPYSAHEINKGHPNLAATPPGHASSPGLSQTPYPSGQN----------AGPA 154

  Fly   132 VICNGSSILTVNSR-QLNSGDMNSTAIY------------NISSYRKLTGSLDGNVCFLNVQDIK 183
            .:....:..|:||: |..|....:..::            ....||.|.|......|        
  Rat   155 TLVYPQAPQTMNSQPQARSPPSRAVPVHCPDNWKRRKVLEQTPVYRSLAGRGWIKYC-------- 211

  Fly   184 QNGNISGSVVSNKSIVGVGSEKSSCTG------VSINNQIVLPNAQIGTSMGI----AGTTTAGT 238
                          |...|...:...|      .....||..|.|.|..|...    |.|.||  
  Rat   212 --------------IFAAGPRPAHHQGGFRPIQFFQRPQIQPPRAAIPNSSPSLRPGAQTPTA-- 260

  Fly   239 SYMHEKNIVGVSVNCVNTSKKYDFNNSSLLSNN---SYPASTAEYVSTGNNNSGNTRSNPQ---S 297
                                .|..|...::.|:   .||..           .|.....||   |
  Rat   261 --------------------VYQANQHIMMVNHLPMPYPVP-----------QGPQYCIPQYRHS 294

  Fly   298 GGIFRGPPST-PNAPRGASGGATRHVHVQPMYSQPLHQNMVLQQYTQYNPRQQTFPASHLQYAPA 361
            |..:.|||.. |..|.|..          |.|..|...:......|.:.|.|..       |..|
  Rat   295 GPPYVGPPQQYPVQPPGPG----------PFYPGPGPGDFANAYGTPFYPSQPV-------YQSA 342

  Fly   362 PMPYYQYQYVPTLQQQPPHTRSAVTVN-TNVNVGNN--LQPVQSG-----PNGPLPVPGASSSQI 418
            |:      .|||.||.||..|...|:. .:.|.|..  .:.:.||     |..|:..|.::.:..
  Rat   343 PI------IVPTQQQPPPAKREKKTIRIRDPNQGGKDITEEIMSGGGSRNPTPPIGRPTSTPTPP 401

  Fly   419 QLLTSTVQPGASTVMGVGGPGSTMGQVGVPPMVGVGVMTTSVQ-----PQPVQVQPASRRRHQHR 478
            |.|.|.....:..|.|      |:....:.....|...:...|     |.||...|::      .
  Rat   402 QQLPSQAPEHSPVVYG------TVESAHLAASTPVTAASDQKQEEKPKPDPVFQSPST------V 454

  Fly   479 LQIIDPTTKKNILDDFDKTKSNTDNEFSDQVTSTNTPATVLSEGPIRIPQQESVGLNN---LTST 540
            |:::....||.......:|.:   .|.|.:...|::|.|:.......:|...|..|::   ||:.
  Rat   455 LRLVLSGEKKEQAGQIPETAA---GEPSPEPPRTSSPTTLPPLARSSLPSPMSAALSSQQLLTAE 516

  Fly   541 SS-QGSESRTNAPYIPIETTPISRTDVGPTPIVSAMTD-----------AP------SVEILPTP 587
            .. :.|.|:.:||  |:. :|.|.| ..|.|   ::||           ||      |..:|...
  Rat   517 DKCELSSSKDDAP--PVR-SPTSCT-AAPGP---SLTDDIGLCKKPCGVAPPDGQLVSSPVLINE 574

  Fly   588 QRGRSKKIPIVSPKNVSESI---VAPITDETD-----------DAGSTPISRATEESMPPNQTHP 638
            ..|..:|:|  :.:|..:.:   |.|:|.|.:           :...|||:.:|..|..|....|
  Rat   575 MNGVGEKLP--AKENTVDMVRQEVLPLTLELEILEHPQEERKVECTPTPITPSTMPSFSPAPPTP 637

  Fly   639 -------NLLISDSSKHKQAVS-------------NSEISKDAPTGLKE-MHVAELESSVASENH 682
                   .:::|.:.....||:             .:.:||||    || ...||.||...:|. 
  Rat   638 PASPPCTPVVLSATIARSPAVATVIQRVVDEGESLRTCLSKDA----KETQDKAEAESDGQTEE- 697

  Fly   683 PAGILDVNVNKSSQSLDFSADPEIDSIGAISPTSPNAVSPILHEVLDNTELSKKLENSTTERFKD 747
                              :|||:    .|.:..||   :|:     .....:.|....|.||.:.
  Rat   698 ------------------TADPQ----NAHAGRSP---APV-----QTATTAPKTWKKTKERTRT 732

  Fly   748 SQSV-----EKPTHQELSLRNATD-ETEISAMALQ---DVNSLDNNQIEKTYPSKPKLNVDVSED 803
            ...|     |....:|||:.:..: |.|..:...|   |.::|...:.|:.       |.:.:|.
  Rat   733 PDEVLEAEAEPKAEEELSVDSVLEPEQEKMSQGFQFERDPSTLKRAKAEEE-------NGEEAEP 790

  Fly   804 I-SSRESAIK---------STSTKNTGVDVGLQSDSKPETTLNDKQDSTDLKVKVSAKISSIINY 858
            : :..|||.:         ||.:...||....:::|                             
  Rat   791 VRNGAESASEGEGGDANSGSTDSSGDGVTFPFKAES----------------------------- 826

  Fly   859 NEGQWSPNNPSGKKQYDREQLLQLREVKASRIQPE----VKNV-----------------SILPQ 902
                |.|.:..||||||||.||.::.:.|...:||    :.:|                 .|||:
  Rat   827 ----WKPADTEGKKQYDREFLLDIQFMPACIQKPEGLPPISDVVLDKINQPRLPMRTLDPRILPR 887

  Fly   903 -PNLMPSFIRNNNNNKRVQSMVGIIGNRSNESAGNYIGKQMSMSGVQSGGGRSSMKGMIH----- 961
             |:..|:|                 .:...::.|   |:.:.:..|   |.|.|..|...     
  Rat   888 GPDFTPAF-----------------ADFGRQTPG---GRGVPLLSV---GPRRSQPGQRREPRKI 929

  Fly   962 VNLSLNQDVKLSENENAWRPRVLNKSDGDSDAKSALEKDELVRRVRGILNKLTPERFDTLVEEII 1026
            :.:|:.:||.|.:.||||:|.  .|.|..:|...:::..||.|:||.|||||||:.|:.|::::.
  Rat   930 ITVSVKEDVHLRKAENAWKPS--QKRDSHADDPESIKTQELFRKVRSILNKLTPQMFNQLMKQVS 992

  Fly  1027 KLKIDTPDKVDEVIVLVFEKAIDEPNFSVSYARLCQRLAA-EVKVIDERMESETKSNSAHFRNAL 1090
            .|.:||.:::..||.||||||||||:|||:||.:|:.|.. :|.:.|:      ..|:.:||..|
  Rat   993 ALTVDTEERLKGVIDLVFEKAIDEPSFSVAYANMCRCLVTLKVPMADK------PGNTVNFRKLL 1051

  Fly  1091 LDKTEQEFTQNVSQSTAKEKKLQPIVDKIKKCTDANEKAELEAFLEEEERKIRRRSGGTVRFIGE 1155
            |::.::||.::.:.....|||.:    :::..:...|:..|...|||.:.|.||||.|.::||||
  Rat  1052 LNRCQKEFEKDKADDDVFEKKQK----ELEAASAPEERTRLHDELEEAKDKARRRSIGNIKFIGE 1112

  Fly  1156 LFKISMLTGKIIYSCIDTLLNPHSEDMLECLCKLLTTVGAKFEKTPVNSKDPSRCYSLEKSITRM 1220
            |||:.|||..|::.|:..||..|.|:.|||||:||||:|          ||    ...||:..||
  Rat  1113 LFKLKMLTEAIMHDCVVKLLKNHDEESLECLCRLLTTIG----------KD----LDFEKAKPRM 1163

  Fly  1221 QAIASKTDK--DGARVSSRVRFMLQDVIDLRKNKWQTSR-NEAPKTMGQIEKEAK----NEQLSA 1278
            ....::.:|  ...:.|||:|||||||||||...|.:.| ::.|||:.||.||||    .||...
  Rat  1164 DQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLCNWVSRRADQGPKTIEQIHKEAKIEEQEEQRKV 1228

  Fly  1279 QYFGTLSSTTPGGSQGGSGKRDDRGNSRYGESRSSSAYGGSHSQRGDNGNLRHQQQNNVGGNV-- 1341
            |...|.....|             |..|..|...::..|..:|:..|........:..:...:  
  Rat  1229 QQLMTKEKRRP-------------GVQRVDEGGWNTVQGAKNSRVLDPSKFLKITKPTIDEKIQL 1280

  Fly  1342 -------SGGAGHSNGNNDENTWHVQTSKGSRSLAVDSNKLEGLSKLSDQNLETKKMGGLTQFIW 1399
                   |.|.|.|.|           :|.|.:.|:.|:                          
  Rat  1281 VPKAQLGSWGKGSSGG-----------AKASETDALRSS-------------------------- 1308

  Fly  1400 ISSDTTRLSSAPTPTPS-NPFAVLSSLIDKNSNERDRDRSGPRNKGSYNKGSMERDRYDRGMHSR 1463
             :|...|.|....|.|| :|.|   :.:|.:|           .:...::|||.|::.|:.:.:.
  Rat  1309 -ASSLNRFSPLQPPAPSGSPSA---TPLDFDS-----------RRALTSRGSMGREKSDKPLPAG 1358

  Fly  1464 T--------GSSQGSRENSSSRGGQQGRTLLSSSVQKSTSHSKYTQQAPPTRHTVKAQSSVGSSN 1520
            |        |||:...:|.|..  :|.|.:|.:  .|..:.....::|.......||:..| .|.
  Rat  1359 TARPNTFLRGSSKDLLDNQSQE--EQRREMLET--VKQLTGGVDAERASTEADRSKARELV-KSE 1418

  Fly  1521 VNTGPLYRGSEQQTSATFSQTTRSVAPVAVFIEASETDLKLIKSVVSEIVDLSAASKEVTPGAVS 1585
            |.|.|                    ||....:...|.:.| .||::.|.:.:: ..||.|    .
  Rat  1419 VCTVP--------------------APDKPALSEEEVERK-SKSIIDEFLHIN-DFKEAT----Q 1457

  Fly  1586 CIKRVPEKLRCSFIYYILTDYLHL-ANVGKQY--------RRYLSIAVSQLIQQNYISADHLRLA 1641
            ||:.:..:           ..||: ..||.::        |.::...:.||:|...:|.......
  Rat  1458 CIEELSAQ-----------GPLHVFVKVGVEFTLERSQITRDHMGHLLYQLVQSEKLSKQDFFKG 1511

  Fly  1642 YNEFTVYANDLIVDIPELWLYILQFAGPLIVKKILTISDLWNNNLKENSPSNVAKKFLKTYLIYC 1706
            ::|....|:|:.:|||.:|||:.:...|::.:..:::.:|.....|...|...|...|...|...
  Rat  1512 FSETLELADDMAIDIPHIWLYLAELVTPMLKEGGISMRELIVEFSKPLLPVGRAGVLLSEILHLL 1576

  Fly  1707 TQEVGPNFARNMWIKFNLKWSDFMPESE-VADFIKFNRLEYVENES--KSPVIDHRETPEKHVKN 1768
            .:::.......:|.:.:|.|.||:||.| |.:|:...:|::.|:|.  .|..:..:|...:.:. 
  Rat  1577 CRQMSHKKVSALWREADLSWKDFLPEGEDVHNFLLEQKLDFTESEGPCSSEALSKKELSAEELS- 1640

  Fly  1769 VIDHIEHLLKEGTTAD-CIIDYSNGNIMVVDKLFIRGLTETLSNF-SIHYKDNSYKLESETFQKF 1831
              ..:|.|:.|....| .|.|:.....:.|    :.||....|.| .:|...             
  Rat  1641 --QRLEKLIMEDKADDERIFDWVEVQTLTV----LCGLCRMASGFLRVHITS------------- 1686

  Fly  1832 CIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPRGLLSELIGELY 1876
              |:|..:..|.......|:||:.|......:.|.::..|...|:
  Rat  1687 --PLLNTFYPSCASGFCACMYTVYLKFRDCFYKRSVIFTLFIYLF 1729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4G1NP_001096852.1 MIF4G 1004..1252 CDD:280935 104/250 (42%)
MA3 1562..1677 CDD:280933 27/123 (22%)
W2_eIF4G1_like 1764..1895 CDD:211397 22/115 (19%)
Eif4g3XP_038965571.1 PHA03247 <65..498 CDD:223021 112/557 (20%)
MIF4G 969..1197 CDD:397130 104/251 (41%)
MA3 1435..1547 CDD:397128 28/128 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I3545
eggNOG 1 0.900 - - E1_KOG0401
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 348 1.000 Inparanoid score I2228
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D594395at2759
OrthoFinder 1 1.000 - - FOG0001079
OrthoInspector 1 1.000 - - otm45802
orthoMCL 1 0.900 - - OOG6_101572
Panther 1 1.100 - - LDO PTHR23253
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1015
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.870

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